Detailed information    

insolico Bioinformatically predicted

Overview

Name   comK   Type   Regulator
Locus tag   ACLQ7P_RS05865 Genome accession   NZ_CP181322
Coordinates   1171413..1171991 (+) Length   192 a.a.
NCBI ID   WP_003245329.1    Uniprot ID   A0A809FND1
Organism   Bacillus subtilis subsp. subtilis strain JCK-1398     
Function   activate transcription of late competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1166413..1176991
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACLQ7P_RS05840 (ACLQ7P_05840) - 1166933..1167448 (-) 516 WP_371149691.1 methyl-accepting chemotaxis protein -
  ACLQ7P_RS05845 (ACLQ7P_05845) - 1167737..1168315 (-) 579 Protein_1085 protoglobin domain-containing protein -
  ACLQ7P_RS05850 (ACLQ7P_05850) comW 1168370..1169898 (-) 1529 Protein_1086 FAD-dependent oxidoreductase -
  ACLQ7P_RS05855 (ACLQ7P_05855) yhxC 1170002..1170859 (+) 858 WP_014479371.1 SDR family oxidoreductase -
  ACLQ7P_RS05860 (ACLQ7P_05860) yhzC 1170887..1171120 (-) 234 WP_003233142.1 IDEAL domain-containing protein -
  ACLQ7P_RS05865 (ACLQ7P_05865) comK 1171413..1171991 (+) 579 WP_003245329.1 competence transcription factor ComK Regulator
  ACLQ7P_RS05870 (ACLQ7P_05870) yhxD 1172037..1172936 (-) 900 WP_076457899.1 SDR family oxidoreductase -
  ACLQ7P_RS05875 (ACLQ7P_05875) yhjA 1173153..1173422 (+) 270 WP_103031835.1 excalibur calcium-binding domain-containing protein -
  ACLQ7P_RS05880 (ACLQ7P_05880) yhjB 1173466..1174935 (-) 1470 WP_043857241.1 sodium:solute symporter family protein -
  ACLQ7P_RS05885 (ACLQ7P_05885) yhjC 1174932..1175132 (-) 201 WP_043857242.1 DUF3311 domain-containing protein -
  ACLQ7P_RS05890 (ACLQ7P_05890) - 1175318..1175680 (-) 363 WP_121591604.1 hypothetical protein -
  ACLQ7P_RS05895 (ACLQ7P_05895) yhjE 1175832..1176455 (+) 624 WP_010886465.1 TVP38/TMEM64 family protein -
  ACLQ7P_RS05900 (ACLQ7P_05900) lepB 1176457..1176963 (+) 507 WP_129137562.1 signal peptidase I -

Sequence

Protein


Download         Length: 192 a.a.        Molecular weight: 22429.68 Da        Isoelectric Point: 7.7153

>NTDB_id=1099680 ACLQ7P_RS05865 WP_003245329.1 1171413..1171991(+) (comK) [Bacillus subtilis subsp. subtilis strain JCK-1398]
MSQKTDAPLESYEVNGATIAVLPEEIDGKICSKIIEKDCVFYVNMKPLQIVDRSCRFFGSSYAGRKAGTYEVTKISHKPP
IMVDPSNQIFLFPTLSSTRPQCGWISHVHVKEFKATEFDDTEVTFSNGKTMELPISYNSFENQVYRTAWLRTKFQDRIDH
RVPKRQEFMLYPKEERTKMIYDFILRELGERY

Nucleotide


Download         Length: 579 bp        

>NTDB_id=1099680 ACLQ7P_RS05865 WP_003245329.1 1171413..1171991(+) (comK) [Bacillus subtilis subsp. subtilis strain JCK-1398]
ATGAGTCAGAAAACAGACGCACCTTTAGAATCGTATGAAGTGAACGGCGCAACAATTGCCGTGCTGCCAGAAGAAATAGA
CGGCAAAATATGTTCCAAAATTATTGAAAAAGATTGCGTGTTTTATGTCAACATGAAGCCGCTGCAAATTGTCGACAGAA
GCTGCCGATTTTTTGGATCAAGCTATGCGGGAAGAAAAGCAGGAACTTATGAAGTGACAAAAATTTCACACAAGCCGCCA
ATCATGGTGGACCCTTCGAATCAAATCTTTTTATTCCCTACACTTTCTTCGACAAGACCCCAATGCGGCTGGATTTCCCA
TGTGCATGTAAAAGAATTCAAAGCGACTGAATTCGACGATACGGAAGTGACGTTTTCAAATGGGAAAACGATGGAGCTGC
CGATCTCTTATAATTCGTTCGAGAACCAGGTATATCGAACAGCGTGGCTTAGAACCAAGTTCCAAGACAGAATCGACCAC
CGCGTGCCGAAAAGGCAGGAATTTATGCTGTACCCGAAGGAAGAGCGGACGAAGATGATTTATGATTTTATTTTGCGTGA
GCTCGGGGAGCGGTATTAG

Domains

Predicted by InterproScan.

ComK protein (ComK)

(10-158)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A809FND1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comK Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment