Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   ACLQ7P_RS04780 Genome accession   NZ_CP181322
Coordinates   976880..977674 (+) Length   264 a.a.
NCBI ID   WP_121591552.1    Uniprot ID   -
Organism   Bacillus subtilis subsp. subtilis strain JCK-1398     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 971880..982674
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACLQ7P_RS04750 (ACLQ7P_04750) sxzA 972719..973750 (+) 1032 WP_043857890.1 FecCD family ABC transporter permease -
  ACLQ7P_RS04755 (ACLQ7P_04755) yfhB 973865..974746 (+) 882 WP_121591549.1 PhzF family phenazine biosynthesis isomerase -
  ACLQ7P_RS04760 (ACLQ7P_04760) yfhC 974834..975418 (+) 585 WP_121591550.1 nitroreductase -
  ACLQ7P_RS04765 (ACLQ7P_04765) yfhD 975457..975648 (-) 192 WP_003233561.1 YfhD family protein -
  ACLQ7P_RS04770 (ACLQ7P_04770) yfhE 975715..975825 (-) 111 WP_003223230.1 YfhE family protein -
  ACLQ7P_RS04775 (ACLQ7P_04775) yfhF 975880..976791 (-) 912 WP_129134233.1 TIGR01777 family oxidoreductase -
  ACLQ7P_RS04780 (ACLQ7P_04780) recX 976880..977674 (+) 795 WP_121591552.1 recombination regulator RecX Regulator
  ACLQ7P_RS04785 (ACLQ7P_04785) yfhH 977676..977990 (+) 315 WP_003244592.1 YfhH family protein -
  ACLQ7P_RS04790 (ACLQ7P_04790) yfhI 978134..979327 (+) 1194 WP_416247390.1 MFS transporter -
  ACLQ7P_RS04795 (ACLQ7P_04795) sspK 979359..979511 (-) 153 WP_003223241.1 small, acid-soluble spore protein K -
  ACLQ7P_RS04800 (ACLQ7P_04800) yfhJ 979636..979905 (+) 270 WP_003243789.1 YfhJ family protein -
  ACLQ7P_RS04810 (ACLQ7P_04810) yfhK 981340..981861 (+) 522 WP_416247391.1 SH3 domain-containing protein -
  ACLQ7P_RS04815 (ACLQ7P_04815) spdL 981946..982278 (+) 333 WP_024573182.1 SdpC immunity protein SpdL -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 30964.16 Da        Isoelectric Point: 6.6687

>NTDB_id=1099677 ACLQ7P_RS04780 WP_121591552.1 976880..977674(+) (recX) [Bacillus subtilis subsp. subtilis strain JCK-1398]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKELKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQLLQEEEN

Nucleotide


Download         Length: 795 bp        

>NTDB_id=1099677 ACLQ7P_RS04780 WP_121591552.1 976880..977674(+) (recX) [Bacillus subtilis subsp. subtilis strain JCK-1398]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGCGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGACCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAAGATCAGACAAGAGAA
GCGGTCAAACATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACGAAAGAACTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACAG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATGAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGAACTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

100

99.621

0.996

Multiple sequence alignment