Detailed information    

insolico Bioinformatically predicted

Overview


Name   nucA/comI   Type   Machinery gene
Locus tag   ACLQ7P_RS01990 Genome accession   NZ_CP181322
Coordinates   367450..367899 (-) Length   149 a.a.
NCBI ID   WP_014475770.1    Uniprot ID   A0A0D1KPR3
Organism   Bacillus subtilis subsp. subtilis strain JCK-1398     
Function   cleavage of dsDNA into ssDNA (predicted from homology)   
DNA processing

Genomic Context


Location: 362450..372899
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACLQ7P_RS01950 (ACLQ7P_01950) - 362805..363002 (+) 198 WP_121509395.1 hypothetical protein -
  ACLQ7P_RS01955 (ACLQ7P_01955) yckC 363022..363476 (+) 455 Protein_341 RDD family protein -
  ACLQ7P_RS01960 (ACLQ7P_01960) yckD 363558..363890 (+) 333 WP_014478794.1 YckD family protein -
  ACLQ7P_RS01965 (ACLQ7P_01965) - 364018..364440 (+) 423 WP_014478795.1 MarR family winged helix-turn-helix transcriptional regulator -
  ACLQ7P_RS01970 (ACLQ7P_01970) - 364428..364748 (+) 321 WP_121591423.1 DUF3147 family protein -
  ACLQ7P_RS01975 (ACLQ7P_01975) - 364767..365482 (+) 716 Protein_345 AAA family ATPase -
  ACLQ7P_RS01980 (ACLQ7P_01980) bglC 365555..366988 (+) 1434 WP_014478799.1 6-phospho-beta-glucosidase -
  ACLQ7P_RS01985 (ACLQ7P_01985) nin/comJ 367025..367423 (-) 399 WP_014478800.1 DNA-entry nuclease inhibitor Regulator
  ACLQ7P_RS01990 (ACLQ7P_01990) nucA/comI 367450..367899 (-) 450 WP_014475770.1 DNA-entry nuclease Machinery gene
  ACLQ7P_RS01995 (ACLQ7P_01995) tlpC 368067..369788 (-) 1722 Protein_349 methyl-accepting chemotaxis protein TlpC -
  ACLQ7P_RS02000 (ACLQ7P_02000) hxlB 369899..370456 (-) 558 WP_017696129.1 6-phospho-3-hexuloisomerase -
  ACLQ7P_RS02005 (ACLQ7P_02005) hxlA 370462..371094 (-) 633 WP_416247304.1 3-hexulose-6-phosphate synthase -
  ACLQ7P_RS02010 (ACLQ7P_02010) hxlR 371326..371688 (+) 363 WP_003246265.1 transcriptional activator HxlR -

Sequence


Protein


Download         Length: 149 a.a.        Molecular weight: 16440.39 Da        Isoelectric Point: 4.5282

>NTDB_id=1099672 ACLQ7P_RS01990 WP_014475770.1 367450..367899(-) (nucA/comI) [Bacillus subtilis subsp. subtilis strain JCK-1398]
MNITTDIIKTILLVIVIIAAAAVGLIKGDFFSADQKTSQTKEYDETIAFPSDRYPETAKHIKDAINEGHSEVCTIDRDGA
EERREQSLKDVPSKKGYDRDEWPMAMCKEGGEGASVEYISPADNRGAGSWVGHQLTDYPDGTKVLFTIQ

Nucleotide


Download         Length: 450 bp        

>NTDB_id=1099672 ACLQ7P_RS01990 WP_014475770.1 367450..367899(-) (nucA/comI) [Bacillus subtilis subsp. subtilis strain JCK-1398]
GTGAACATCACGACGGACATCATAAAAACGATACTTCTCGTCATCGTCATCATAGCAGCTGCAGCTGTCGGCCTGATAAA
AGGAGACTTTTTCTCAGCTGATCAAAAAACGTCTCAAACGAAAGAATATGATGAAACAATCGCCTTCCCATCTGACCGGT
ATCCCGAAACTGCCAAGCATATTAAGGATGCGATAAATGAGGGGCACTCAGAGGTGTGCACTATTGACAGAGACGGAGCT
GAAGAACGCCGCGAGCAATCATTAAAGGACGTACCTTCCAAAAAGGGGTATGACAGAGATGAATGGCCAATGGCCATGTG
CAAAGAAGGCGGTGAGGGAGCTTCTGTAGAATACATTTCTCCCGCTGACAACCGCGGAGCAGGCTCTTGGGTCGGGCATC
AGCTTACCGATTACCCAGACGGCACAAAGGTTTTATTCACAATTCAGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0D1KPR3

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nucA/comI Bacillus subtilis subsp. subtilis str. 168

98.658

100

0.987


Multiple sequence alignment