Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   ACM7Q1_RS22300 Genome accession   NZ_CP181317
Coordinates   4938073..4939026 (+) Length   317 a.a.
NCBI ID   WP_251643098.1    Uniprot ID   -
Organism   Paenibacillus illinoisensis strain So839b     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 4933073..4944026
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACM7Q1_RS22270 (ACM7Q1_22270) - 4933076..4934536 (+) 1461 WP_416293569.1 catalase -
  ACM7Q1_RS22275 (ACM7Q1_22275) - 4934794..4935210 (+) 417 WP_095291044.1 BlaI/MecI/CopY family transcriptional regulator -
  ACM7Q1_RS22280 (ACM7Q1_22280) - 4935212..4936072 (+) 861 WP_416293571.1 M56 family metallopeptidase -
  ACM7Q1_RS22285 (ACM7Q1_22285) - 4936114..4936524 (+) 411 WP_416293573.1 DoxX family protein -
  ACM7Q1_RS22290 (ACM7Q1_22290) - 4936738..4937439 (+) 702 WP_416293575.1 pirin family protein -
  ACM7Q1_RS22295 (ACM7Q1_22295) - 4937495..4937830 (+) 336 WP_221805809.1 hypothetical protein -
  ACM7Q1_RS22300 (ACM7Q1_22300) ceuB 4938073..4939026 (+) 954 WP_251643098.1 ABC transporter permease Machinery gene
  ACM7Q1_RS22305 (ACM7Q1_22305) - 4939029..4939991 (+) 963 WP_153980249.1 iron chelate uptake ABC transporter family permease subunit -
  ACM7Q1_RS22310 (ACM7Q1_22310) - 4939985..4940743 (+) 759 WP_095360058.1 ABC transporter ATP-binding protein -
  ACM7Q1_RS22315 (ACM7Q1_22315) - 4940783..4941769 (+) 987 WP_416293578.1 siderophore ABC transporter substrate-binding protein -
  ACM7Q1_RS22320 (ACM7Q1_22320) - 4941946..4943529 (+) 1584 WP_416293580.1 spore germination protein -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 34892.00 Da        Isoelectric Point: 10.0470

>NTDB_id=1099633 ACM7Q1_RS22300 WP_251643098.1 4938073..4939026(+) (ceuB) [Paenibacillus illinoisensis strain So839b]
MKLGYMLIALVVLSFVYIFIGNSDISPLDIFHLTPVQLQVLQVSRFPRLISILVAGISMSVIGLIMQQLTRNRFVSPTTA
GTMDSARLGILVTLMWFPGASSLQKMLVAFAFALAGTLIFMRILEKVKFKDTIYIALLGLMFGNIVSSVTTFFAYKNDLI
QNISSWLQGDFSTIMKGRYELIYISIPLLIIVYLFANRFTLAGMGEDFATNLGLAYRRVVNLGLILVAMVSAVVIITVGT
IPFLGLVVPNIVTLYKGDNLRDTLPHTAVLGAIFVLVCDILGQLIIYPYQLSISLTVGVVGSVLFLYLLLRRKANGS

Nucleotide


Download         Length: 954 bp        

>NTDB_id=1099633 ACM7Q1_RS22300 WP_251643098.1 4938073..4939026(+) (ceuB) [Paenibacillus illinoisensis strain So839b]
ATGAAGTTAGGTTATATGTTGATCGCACTGGTTGTTCTGTCTTTCGTTTACATATTTATCGGCAACTCGGACATTTCGCC
CCTGGATATATTCCACTTGACCCCAGTGCAGCTGCAGGTACTGCAAGTCAGCCGGTTTCCCCGTCTGATCAGCATTCTGG
TCGCGGGCATCAGTATGAGCGTGATTGGTCTGATTATGCAGCAGCTGACACGCAACCGGTTTGTTTCGCCTACAACAGCA
GGCACCATGGATTCCGCAAGGCTTGGAATTCTGGTGACCCTGATGTGGTTCCCTGGCGCGTCCTCTCTGCAAAAAATGCT
GGTTGCCTTCGCCTTTGCCCTGGCAGGTACGCTGATCTTTATGCGAATACTCGAGAAGGTTAAATTCAAGGACACGATCT
ACATCGCTCTTCTGGGCTTGATGTTCGGTAACATCGTTAGTTCGGTAACGACCTTTTTTGCTTACAAAAACGATTTGATC
CAAAACATATCCTCTTGGCTGCAGGGTGACTTCTCCACCATCATGAAGGGCCGATATGAATTGATCTATATCAGTATTCC
GCTGCTGATTATCGTCTATCTCTTCGCCAACCGTTTCACACTGGCGGGGATGGGAGAAGACTTCGCGACCAACCTGGGCC
TGGCATATCGGAGAGTGGTGAACCTCGGGTTGATTCTGGTAGCCATGGTCTCGGCTGTAGTCATTATCACCGTAGGCACC
ATTCCGTTTTTGGGTCTGGTCGTGCCCAACATTGTGACCCTGTATAAGGGAGATAACTTGCGTGACACGCTGCCCCATAC
GGCCGTACTTGGAGCGATATTCGTTCTGGTCTGTGACATTCTGGGTCAATTGATTATTTATCCGTACCAGCTGTCCATCA
GTTTGACAGTGGGAGTCGTAGGCAGTGTGCTGTTTCTGTATTTACTGCTTCGAAGAAAGGCAAATGGGTCATGA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.427

97.476

0.511

Multiple sequence alignment