Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   ACM67B_RS08290 Genome accession   NZ_CP181247
Coordinates   1729443..1729868 (+) Length   141 a.a.
NCBI ID   WP_416190550.1    Uniprot ID   -
Organism   Neisseria sp. CCUG17229     
Function   inhibition of RecA (predicted from homology)   
Competence regulation

Genomic Context

Location: 1724443..1734868
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACM67B_RS08265 (ACM67B_08265) - 1724715..1725275 (+) 561 WP_416189209.1 AAA family ATPase -
  ACM67B_RS08270 (ACM67B_08270) - 1725264..1725524 (-) 261 WP_416189210.1 hypothetical protein -
  ACM67B_RS08275 (ACM67B_08275) - 1725532..1726752 (+) 1221 WP_416189211.1 aspartate kinase -
  ACM67B_RS08280 (ACM67B_08280) - 1726965..1728227 (-) 1263 WP_416189212.1 Glu/Leu/Phe/Val family dehydrogenase -
  ACM67B_RS08285 (ACM67B_08285) - 1728610..1729329 (+) 720 WP_416189213.1 phosphoglycolate phosphatase -
  ACM67B_RS08290 (ACM67B_08290) recX 1729443..1729868 (+) 426 WP_416190550.1 recombination regulator RecX Regulator
  ACM67B_RS08295 (ACM67B_08295) - 1729942..1730109 (+) 168 WP_416189214.1 hypothetical protein -
  ACM67B_RS08300 (ACM67B_08300) lptG 1730174..1731244 (-) 1071 WP_416189215.1 LPS export ABC transporter permease LptG -
  ACM67B_RS08305 (ACM67B_08305) lptF 1731241..1732356 (-) 1116 WP_416189216.1 LPS export ABC transporter permease LptF -
  ACM67B_RS08310 (ACM67B_08310) - 1732580..1733989 (+) 1410 WP_416189217.1 leucyl aminopeptidase -
  ACM67B_RS08315 (ACM67B_08315) - 1734081..1734521 (+) 441 WP_416190551.1 DNA polymerase III subunit chi -

Sequence

Protein


Download         Length: 141 a.a.        Molecular weight: 16630.72 Da        Isoelectric Point: 6.2630

>NTDB_id=1099582 ACM67B_RS08290 WP_416190550.1 1729443..1729868(+) (recX) [Neisseria sp. CCUG17229]
MDILSRQEISRVGLKRKLAPHAESEEELEKVLDEFAERNWQSDERYAEAYIHSKSRQHGKLRLQQALAQQGIDADISREF
MPDKESELQTAIQVLRKKFKQPSRDLKEKQKQVRFLAYRGFDMGTIQAALKSDWVEDDDFY

Nucleotide


Download         Length: 426 bp        

>NTDB_id=1099582 ACM67B_RS08290 WP_416190550.1 1729443..1729868(+) (recX) [Neisseria sp. CCUG17229]
ATGGATATTTTATCGCGCCAAGAAATCAGCCGTGTCGGCCTCAAGCGCAAGCTCGCGCCGCATGCCGAAAGCGAAGAAGA
ATTGGAAAAAGTGTTGGACGAATTTGCTGAGCGCAATTGGCAATCCGACGAACGCTACGCCGAAGCCTACATCCACAGCA
AAAGCCGCCAACACGGCAAATTGCGCTTGCAGCAGGCTTTGGCGCAGCAAGGCATTGATGCCGATATCAGCCGCGAATTT
ATGCCGGATAAAGAAAGCGAATTGCAAACCGCGATTCAGGTTTTACGCAAAAAATTCAAGCAGCCCAGCCGTGATTTGAA
AGAGAAACAAAAGCAGGTGCGCTTTCTCGCTTACCGTGGTTTCGACATGGGCACGATTCAAGCGGCTTTAAAAAGCGATT
GGGTAGAAGATGATGACTTTTATTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(19-132)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Neisseria gonorrhoeae strain FA1090

75.912

97.163

0.738

Multiple sequence alignment