Detailed information NTG1099540

Bioinformatically predicted

Overview

• Name: tpc
• Type: Machinery gene
• Locus tag: ACM67C_RS04560
• Genome accession: NZ_CP181246
• Coordinates: 942803..943876 (-)
• Length: 357 a.a.
• NCBI ID: WP_066076972.1
• Uniprot ID: A0A378UER8
• Organism: Bergeriella denitrificans strain DSM 17675
• Function: DNA processing; DNA transport into the cytoplasm (predicted from homology) DNA processing DNA binding and uptake

Genomic Context

Location: 937803..948876

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACM67C_RS04540 (ACM67C_04540)	-	938681..939478 (-)	798	WP_066076959.1	Cof-type HAD-IIB family hydrolase	-
ACM67C_RS04545 (ACM67C_04545)	-	939586..940407 (+)	822	WP_066076963.1	alpha/beta hydrolase	-
ACM67C_RS04550 (ACM67C_04550)	purF	940489..942027 (-)	1539	WP_066076966.1	amidophosphoribosyltransferase	-
ACM67C_RS04555 (ACM67C_04555)	-	942278..942787 (-)	510	WP_066076969.1	CvpA family protein	-
ACM67C_RS04560 (ACM67C_04560)	tpc	942803..943876 (-)	1074	WP_066076972.1	SPOR domain-containing protein	Machinery gene
ACM67C_RS04565 (ACM67C_04565)	folC	943953..945230 (-)	1278	WP_066076974.1	bifunctional tetrahydrofolate synthase/dihydrofolate synthase	-
ACM67C_RS04570 (ACM67C_04570)	-	945356..945823 (-)	468	WP_066076976.1	protein YgfX	-
ACM67C_RS04575 (ACM67C_04575)	-	945827..946186 (-)	360	WP_066076979.1	hypothetical protein	-
ACM67C_RS04580 (ACM67C_04580)	-	946255..946983 (-)	729	WP_066076982.1	amino acid ABC transporter ATP-binding protein	-
ACM67C_RS04585 (ACM67C_04585)	rsmA	946999..947778 (-)	780	WP_066076984.1	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA	-

Sequence

Protein

• Length: 357 a.a.
• Molecular weight: 37216.84 Da
• Isoelectric Point: 10.3162

>NTDB_id=1099540 ACM67C_RS04560 WP_066076972.1 942803..943876(-) (tpc) [Bergeriella denitrificans strain DSM 17675]
MSDHKQTEVLTGYEQLKRRNRRRLVTASGLVLVSGIMLAVSLGSCSSNEKTAPAAAEQEAAPAPAAASAASAESVEITPT
AATPEETAQATDNGEPAELKESVEVLKPQTIQAGEEAEPLVLINNTLVDSDIKGLEESERLLQAEAAKRAAEEKRAEERR
ARQAEQRKQAAAKAAAEREAAAKKRAAAAKAEKAAADKAAASKQAADKAAEQRKQAAAAKAAAERKAKQQAEAKKEAAKP
KADSKTAAAAKNTAAAAKKPSEKAAADSKAAAKNTGKAAASGGQRAAIQAGYAEKERAQSLQRKMKAAGINSKIIEINTD
KGKVYRVKSEAYKSREAAGRDLEKLRVHGIAGAVVNE

Nucleotide

• Length: 1074 bp

>NTDB_id=1099540 ACM67C_RS04560 WP_066076972.1 942803..943876(-) (tpc) [Bergeriella denitrificans strain DSM 17675]
ATGTCCGATCATAAACAAACAGAAGTGCTGACCGGCTACGAACAGCTCAAACGCCGCAACCGCCGCCGCTTGGTCACGGC
TTCCGGTTTGGTCTTGGTATCCGGCATCATGCTGGCCGTTTCGCTCGGCTCCTGCAGCAGCAATGAAAAAACCGCGCCGG
CCGCCGCCGAGCAGGAAGCCGCACCCGCACCGGCCGCTGCTTCCGCCGCGTCTGCCGAGAGTGTGGAAATCACCCCGACT
GCCGCCACACCCGAAGAAACCGCCCAAGCCACCGACAACGGCGAGCCGGCCGAGCTGAAAGAATCCGTCGAAGTATTGAA
GCCGCAAACCATACAGGCGGGCGAAGAAGCCGAGCCGCTGGTGCTGATTAACAATACGCTGGTGGACAGCGACATCAAAG
GCTTGGAAGAATCCGAGCGTCTCCTGCAGGCCGAAGCCGCCAAGCGTGCCGCCGAAGAAAAGCGTGCCGAAGAGCGCCGC
GCCCGTCAGGCCGAGCAGCGTAAGCAGGCTGCCGCCAAAGCCGCTGCCGAACGCGAAGCCGCCGCGAAAAAACGTGCGGC
CGCTGCCAAAGCGGAAAAAGCCGCTGCCGACAAGGCCGCAGCCAGCAAGCAGGCTGCCGATAAAGCCGCCGAGCAGCGCA
AACAGGCTGCAGCCGCCAAAGCCGCCGCCGAGCGCAAAGCCAAGCAGCAGGCCGAAGCCAAAAAAGAAGCCGCCAAGCCT
AAGGCCGACAGCAAAACCGCAGCCGCCGCCAAGAACACCGCCGCCGCTGCCAAAAAGCCGTCTGAAAAAGCCGCAGCAGA
CAGCAAAGCCGCTGCCAAAAACACCGGTAAAGCCGCCGCTTCGGGCGGACAACGCGCCGCCATCCAGGCCGGTTATGCCG
AAAAAGAACGCGCCCAAAGCCTCCAGCGCAAAATGAAAGCCGCCGGTATCAACTCTAAAATCATCGAGATTAATACCGAC
AAAGGCAAGGTTTACCGCGTGAAATCCGAAGCCTATAAGAGCCGCGAAGCCGCCGGCCGCGATTTGGAAAAACTGCGCGT
ACACGGCATTGCCGGCGCGGTGGTGAACGAATAA

Domains

Predicted by InterproScan.

• SPOR domain (SPOR) (287-355)

3D structure

• AlphaFold DB: A0A378UER8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
tpc	Neisseria gonorrhoeae MS11	47.044	100	0.513