Detailed information NTG1099525

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: ACM67C_RS00355
• Genome accession: NZ_CP181246
• Coordinates: 78133..79560 (+)
• Length: 475 a.a.
• NCBI ID: WP_416178185.1
• Uniprot ID: -
• Organism: Bergeriella denitrificans strain DSM 17675
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 73133..84560

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACM67C_RS00345 (ACM67C_00345)	murA	73701..74954 (+)	1254	WP_066076686.1	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	-
ACM67C_RS00350 (ACM67C_00350)	mutS	75038..77641 (-)	2604	WP_066076689.1	DNA mismatch repair protein MutS	-
ACM67C_RS00355 (ACM67C_00355)	pilA	78133..79560 (+)	1428	WP_416178185.1	signal recognition particle-docking protein FtsY	Machinery gene
ACM67C_RS00360 (ACM67C_00360)	-	80132..80935 (-)	804	WP_066077660.1	OmpA family protein	-
ACM67C_RS00365 (ACM67C_00365)	-	81023..82684 (-)	1662	WP_169798082.1	YadA family autotransporter adhesin	-

Sequence

Protein

• Length: 475 a.a.
• Molecular weight: 49975.90 Da
• Isoelectric Point: 4.0774

>NTDB_id=1099525 ACM67C_RS00355 WP_416178185.1 78133..79560(+) (pilA) [Bergeriella denitrificans strain DSM 17675]
MEAVIEATAEQAAAETVEESVVEAATAATTEQPSEKDGTETESLTTETPLAEEADTAAVVEAVATESVAPETFVAETAET
EQPSEKIESAEQVAAAETVVVAEEAETVSAAAQPFEIREAGTREEAESSDIGAEQPSEEAAETEAETANTEAVPAAVTAT
APEVAPEPESAPKPGWAARLKQGLSKSRDKMAKSLAGVFGGGKIDEDLYEELETVLITSDMGMEATEYLMKDVRNRVSFK
GLKDGEELRGALKEAVYDLIKPLEQPLVLPQTNEPFVIMLAGINGAGKTTSIGKLAKYFQSQGKSVLLAAGDTFRAAARE
QLQEWGERNGVTVISQSTGDSAAVCFDAVQAAKARGIDVVLADTAGRLPTQLHLMEEIKKVKRVLQKAMPDAPHEIIVVL
DANIGQNAVNQVRAFDDALGLTGLIVTKLDGTAKGGVLAALASDRPIPVRYIGVGEGIDDLRPFGARAFVDALLD

Nucleotide

• Length: 1428 bp

>NTDB_id=1099525 ACM67C_RS00355 WP_416178185.1 78133..79560(+) (pilA) [Bergeriella denitrificans strain DSM 17675]
CTGGAAGCCGTTATTGAGGCCACCGCAGAACAGGCCGCAGCGGAAACTGTTGAAGAAAGCGTGGTTGAGGCCGCTACCGC
AGCAACAACGGAACAGCCGTCTGAAAAGGATGGTACGGAAACAGAAAGCCTGACAACTGAAACACCGCTTGCAGAGGAAG
CAGACACCGCAGCGGTTGTTGAAGCGGTTGCAACCGAAAGCGTTGCGCCTGAAACATTCGTTGCAGAAACTGCTGAAACG
GAACAGCCGTCTGAAAAGATTGAATCCGCAGAACAAGTTGCGGCGGCGGAAACCGTGGTTGTTGCCGAAGAGGCAGAAAC
CGTATCTGCTGCCGCACAGCCGTTTGAAATCAGGGAAGCGGGAACCCGCGAAGAAGCGGAAAGCAGCGATATTGGGGCGG
AGCAGCCGTCTGAAGAAGCCGCTGAAACCGAAGCGGAAACGGCAAACACGGAAGCCGTACCCGCTGCTGTGACGGCTACC
GCCCCCGAAGTTGCTCCGGAACCGGAATCCGCGCCCAAGCCCGGTTGGGCGGCGCGTTTGAAGCAGGGTTTGAGCAAATC
CCGCGATAAAATGGCCAAATCGCTGGCGGGTGTATTCGGTGGCGGCAAAATCGACGAGGATTTGTACGAAGAGCTGGAAA
CGGTTTTGATTACCAGCGACATGGGCATGGAAGCGACCGAGTATCTGATGAAAGACGTGCGCAACCGCGTATCGTTCAAA
GGTTTGAAAGACGGCGAAGAATTGCGCGGCGCGTTGAAAGAGGCGGTTTACGACTTAATCAAGCCGCTGGAGCAACCGCT
GGTGTTGCCGCAAACCAATGAGCCGTTTGTGATTATGCTGGCAGGGATTAACGGTGCGGGTAAAACCACGTCCATCGGCA
AGCTGGCGAAATATTTCCAATCGCAAGGCAAATCCGTGTTGCTGGCGGCGGGCGACACCTTCCGCGCGGCGGCGCGCGAG
CAGTTGCAGGAATGGGGCGAGCGCAACGGCGTTACCGTGATTTCGCAATCTACGGGCGATTCGGCGGCGGTGTGCTTCGA
TGCGGTGCAGGCGGCCAAAGCGCGCGGTATCGACGTGGTGCTGGCGGATACCGCCGGACGGCTGCCGACCCAGCTGCATT
TGATGGAGGAAATCAAGAAAGTGAAGCGCGTGCTGCAAAAAGCCATGCCCGACGCGCCGCACGAAATCATCGTGGTACTC
GATGCCAATATCGGCCAAAACGCGGTTAACCAGGTGAGGGCGTTTGACGATGCGCTGGGGCTGACCGGCCTGATTGTGAC
CAAACTCGACGGCACGGCCAAAGGCGGTGTGCTGGCGGCCTTGGCCTCCGACCGTCCGATTCCGGTGCGCTATATCGGTG
TGGGCGAGGGTATCGACGACTTGCGCCCGTTTGGTGCGCGGGCCTTTGTGGATGCGTTGTTGGATTAG

Domains

Predicted by InterproScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (190-255)

• SRP54-type protein, GTPase domain (SRP54) (275-474)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	85.591	73.053	0.625