Detailed information    

insolico Bioinformatically predicted

Overview

Name   recG   Type   Machinery gene
Locus tag   ACM67D_RS00590 Genome accession   NZ_CP181245
Coordinates   128868..130910 (+) Length   680 a.a.
NCBI ID   WP_003687383.1    Uniprot ID   -
Organism   Neisseria gonorrhoeae strain LNP 16626     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 123868..135910
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACM67D_RS00565 (ACM67D_00565) - 124352..124981 (+) 630 WP_003687375.1 response regulator transcription factor -
  ACM67D_RS00570 (ACM67D_00570) - 125063..126314 (+) 1252 Protein_111 ATP-binding protein -
  ACM67D_RS00575 (ACM67D_00575) rng 126349..127842 (-) 1494 WP_003687377.1 ribonuclease G -
  ACM67D_RS00580 (ACM67D_00580) grxC 128061..128318 (+) 258 WP_003687379.1 glutaredoxin 3 -
  ACM67D_RS00585 (ACM67D_00585) secB 128339..128782 (+) 444 WP_003687381.1 protein-export chaperone SecB -
  ACM67D_RS00590 (ACM67D_00590) recG 128868..130910 (+) 2043 WP_003687383.1 ATP-dependent DNA helicase RecG Machinery gene
  ACM67D_RS00595 (ACM67D_00595) argC 131504..132547 (-) 1044 WP_003687386.1 N-acetyl-gamma-glutamyl-phosphate reductase -
  ACM67D_RS00600 (ACM67D_00600) - 132544..132837 (-) 294 WP_002258326.1 hypothetical protein -
  ACM67D_RS00605 (ACM67D_00605) - 133091..134245 (+) 1155 WP_139595841.1 cupin domain-containing protein -
  ACM67D_RS00610 (ACM67D_00610) - 134254..134481 (+) 228 WP_003687394.1 hypothetical protein -
  ACM67D_RS00615 (ACM67D_00615) - 134556..134828 (+) 273 WP_226888059.1 hypothetical protein -

Sequence

Protein


Download         Length: 680 a.a.        Molecular weight: 74849.86 Da        Isoelectric Point: 7.6786

>NTDB_id=1099480 ACM67D_RS00590 WP_003687383.1 128868..130910(+) (recG) [Neisseria gonorrhoeae strain LNP 16626]
MMSPETQKQLKITDASAKKLDKLNLHTAWDLVLHLPLRYEDETHIMPIKDAPIGVPCQVEGEVIHQEVTFKPRKQLIVQI
ADGSGSVLFLRFIHFYAGHQKQTAVGKRIRAVGEIKHGFYGDEMIHPKIRDAEGGGLAESLTPVYPTVNGLNQPTLRRII
QTALDVTPLHDTLPDALLCRLKLPHLAESLRLLHSPPPSFTIHQLSDGTLPAWQRLKFDELLAQQLSMRLARQKRVSGTA
AALRGDGTLTQALRQALPFALTDAQEKVVSEICRDMAQTHPMHRLLQGDVGSGKTIVAALSALTAIESGAQVAVMTPTEI
LAEQHFIKFKQWLEPLGIEVVCLFGSLRKKAKDEAKAKLADGSVKIAVGTHALFSDGVAFHNLGLSIVDEQHRFGVAQRL
ALKNKGREVHQLMMSATPIPRTLAMSFFADLDVSVIDELPPGRTPIKTRLVNNVRRAEVEGFVLGTCRKGRQAYWVCPLI
EESETLQLQTAAETLARLQTALPEPNIGLVHGRMKAAEKAEVMAEFAAGRLNVLVATTVIEVGVDVPNAALMVIEHAERM
GLAQLHQLRGRVGRGAAESVCVLLFAEPLGELAKARLKVIYEHTDGFEIARQDLNIRGPGEFLGARQSGVPMLRFAKLEE
DLHLLEQARETAPMLIEQNPEIVEAHLARWLSGREGYLGV

Nucleotide


Download         Length: 2043 bp        

>NTDB_id=1099480 ACM67D_RS00590 WP_003687383.1 128868..130910(+) (recG) [Neisseria gonorrhoeae strain LNP 16626]
ATGATGTCGCCCGAAACCCAGAAACAGCTCAAAATCACCGATGCTTCCGCCAAGAAGCTCGACAAACTCAACCTCCATAC
CGCGTGGGATTTGGTGTTGCACCTGCCGCTGCGTTACGAGGACGAGACGCACATTATGCCGATTAAGGACGCGCCGATTG
GCGTGCCGTGTCAGGTCGAGGGCGAGGTTATCCATCAGGAAGTAACGTTCAAACCGCGCAAGCAGCTGATTGTCCAAATT
GCCGACGGTTCCGGCAGCGTCCTTTTTCTGCGCTTCATCCATTTTTACGCCGGACATCAGAAGCAGACGGCGGTCGGCAA
ACGCATCCGCGCCGTGGGCGAAATCAAACACGGATTTTACGGCGACGAGATGATTCATCCCAAAATCCGCGATGCCGAGG
GCGGCGGTTTGGCGGAAAGCCTCACGCCGGTTTACCCGACCGTAAACGGTTTGAACCAGCCCACTTTGCGCCGCATCATT
CAGACGGCGTTGGACGTTACGCCGCTGCACGACACGCTGCCCGATGCCCTGCTGTGCCGTCTGAAGCTGCCGCACCTTGC
CGAAAGCCTGCGCCTTTTGCATTCGCCGCCGCCGAGTTTCACTATTCATCAACTTTCAGACGGCACGCTGCCGGCGTGGC
AGCGGCTCAAATTCGACGAACTTTTGGCGCAACAGTTGTCCATGCGTTTGGCGCGGCAGAAGCGCGTCAGCGGCACGGCG
GCGGCATTGCGCGGCGACGGCACATTGACCCAAGCCCTGCGCCAAGCCCTGCCGTTTGCCCTGACCGATGCACAAGAAAA
AGTTGTTTCCGAAATCTGCCGCGATATGGCGCAAACCCACCCCATGCACCGCCTGCTGCAAGGCGATGTCGGCAGCGGCA
AAACCATCGTCGCCGCCTTATCCGCGCTGACCGCCATCGAATCAGGCGCGCAAGTGGCTGTAATGACGCCCACTGAAATC
CTTGCCGAACAGCACTTCATCAAGTTCAAACAATGGCTGGAACCTTTGGGCATTGAAGTTGTCTGCCTTTTTGGCAGTTT
GCGCAAAAAAGCCAAAGACGAAGCCAAAGCCAAACTCGCCGACGGCAGCGTCAAAATCGCCGTCGGCACGCACGCCCTGT
TTTCAGACGGCGTGGCGTTTCACAATTTGGGCTTGAGCATTGTGGACGAACAGCACCGTTTCGGCGTTGCACAACGCCTC
GCACTCAAAAACAAAGGGCGCGAAGTCCATCAGCTGATGATGTCCGCCACACCCATCCCGCGCACGCTCGCCATGAGCTT
CTTCGCTGACTTGGACGTATCCGTCATCGACGAATTGCCGCCCGGGCGCACGCCGATTAAAACGCGCCTCGTCAACAACG
TCCGCCGCGCCGAAGTCGAAGGCTTCGTCCTCGGCACTTGCCGAAAAGGGCGGCAGGCATATTGGGTCTGCCCATTGATT
GAAGAAAGCGAAACCCTGCAACTGCAAACCGCCGCCGAAACCCTCGCCCGGCTTCAGACGGCATTGCCCGAACCCAATAT
CGGACTGGTACACGGGCGCATGAAGGCCGCCGAAAAGGCTGAAGTCATGGCGGAATTTGCCGCAGGCCGTCTGAACGTCT
TGGTTGCCACCACCGTCATCGAAGTCGGCGTAGATGTGCCCAACGCCGCCCTGATGGTGATCGAACACGCCGAGCGCATG
GGCTTGGCGCAGCTTCACCAATTACGCGGACGGGTAGGGCGCGGCGCGGCGGAAAGCGTGTGCGTCCTCCTGTTTGCCGA
ACCCTTGGGCGAACTCGCCAAAGCGCGGCTGAAAGTCATCTACGAACACACCGACGGCTTCGAAATCGCCCGCCAAGACC
TCAACATCCGCGGCCCCGGCGAATTTCTCGGCGCGCGCCAAAGCGGCGTGCCTATGCTGCGCTTCGCCAAGCTCGAAGAA
GACTTACACCTTTTGGAACAAGCGCGCGAAACCGCCCCGATGCTGATTGAACAAAACCCTGAAATCGTCGAAGCGCATTT
GGCAAGGTGGCTTTCCGGCAGGGAAGGTTATTTGGGTGTGTGA

Domains

Predicted by InterproScan.

DEAD/DEAH box helicase (DEAD)

(262-421)

Helicase conserved C-terminal domain (Helicase_C)

(469-575)

RecG wedge domain (RecG_wedge)

(13-164)

ATP-dependent DNA helicase RecG, domain 3, C-terminal (RecG_dom3_C)

(604-666)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recG Neisseria meningitidis strain C311

97.794

100

0.978

Multiple sequence alignment