Detailed information NTG1099437

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: ACM67E_RS00060
• Genome accession: NZ_CP181244
• Coordinates: 14217..15602 (-)
• Length: 461 a.a.
• NCBI ID: WP_416192786.1
• Uniprot ID: -
• Organism: Neisseria sp. CCUG12390
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 9217..20602

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACM67E_RS00040 (ACM67E_00040)	glgA	9500..10921 (+)	1422	WP_416191648.1	glycogen synthase GlgA	-
ACM67E_RS00045 (ACM67E_00045)	-	11042..12253 (-)	1212	WP_416191649.1	DUF819 domain-containing protein	-
ACM67E_RS00050 (ACM67E_00050)	rarD	12305..13210 (-)	906	WP_416191650.1	EamA family transporter RarD	-
ACM67E_RS00055 (ACM67E_00055)	-	13615..13881 (-)	267	WP_416191651.1	DUF3079 domain-containing protein	-
ACM67E_RS00060 (ACM67E_00060)	pilA	14217..15602 (-)	1386	WP_416192786.1	signal recognition particle-docking protein FtsY	Machinery gene
ACM67E_RS00065 (ACM67E_00065)	mnmE	16318..17709 (-)	1392	WP_416191652.1	tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE	-
ACM67E_RS00070 (ACM67E_00070)	-	17857..18321 (-)	465	WP_416191653.1	hypothetical protein	-
ACM67E_RS00075 (ACM67E_00075)	-	18507..18779 (-)	273	WP_416191654.1	hypothetical protein	-
ACM67E_RS00080 (ACM67E_00080)	-	19028..19453 (+)	426	WP_416191655.1	CopD family protein	-
ACM67E_RS00085 (ACM67E_00085)	-	19468..19953 (+)	486	WP_416191656.1	CYTH domain-containing protein	-

Sequence

Protein

• Length: 461 a.a.
• Molecular weight: 48806.08 Da
• Isoelectric Point: 4.2719

>NTDB_id=1099437 ACM67E_RS00060 WP_416192786.1 14217..15602(-) (pilA) [Neisseria sp. CCUG12390]
MPSETVKTAEPLPQNEDAETVLTDSGKVVIDYVQIPEDAAVVPASGQTAEIAAQDTAAVESAGEVPPTEVETLPTAAEES
ALETAWDSTFPEAETAGNQAAEAEPAQVSEKQEILEIEPVSSSGSAQSMPSENIAQAAAAAATAATTQSLPEDDGAQTKL
SWASRLKQGLTKSRDKMAKSLAGVFGGGKIDEDLYEELETVLITSDMGMEATNYLMKDVRNRVSLKGLKDGEELRGALKE
AIYDLIKPLERPLVLPESKEPFVIMLAGINGAGKTTSIGKLAKYFQSQGKSVLLAAGDTFRAAAREQLQEWGERNNVTVI
SQSTGDSAAVCFDAVQAAKARGIDIVLADTAGRLPTQLHLMEEIKKVKRVLQKAMPDAPHEIIVVLDANIGQNAVNQVKA
FDEALGLTGLIVTKLDGTAKGGILAALASDRPIPVRYIGVGERIDDLRPFDARAFVDALLD

Nucleotide

• Length: 1386 bp

>NTDB_id=1099437 ACM67E_RS00060 WP_416192786.1 14217..15602(-) (pilA) [Neisseria sp. CCUG12390]
ATGCCGTCTGAAACGGTAAAAACAGCCGAACCGCTGCCGCAGAATGAAGATGCGGAAACCGTTTTGACCGACAGCGGCAA
AGTGGTGATTGATTATGTGCAAATACCGGAAGACGCCGCTGTCGTACCGGCATCGGGGCAGACGGCGGAAATTGCCGCTC
AAGACACGGCAGCTGTTGAATCCGCCGGAGAAGTGCCGCCGACGGAAGTGGAAACCCTGCCGACGGCGGCGGAAGAATCC
GCGCTTGAAACAGCTTGGGATTCGACCTTCCCCGAGGCGGAAACAGCCGGAAACCAAGCGGCGGAGGCCGAGCCTGCGCA
AGTTTCCGAAAAACAGGAAATCCTTGAAATTGAACCGGTTAGCTCTAGCGGTTCGGCTCAATCAATGCCGTCTGAAAACA
TTGCGCAAGCTGCCGCTGCCGCCGCAACCGCAGCGACAACCCAATCCCTGCCGGAAGACGACGGTGCGCAGACCAAATTA
AGCTGGGCTTCCCGCCTAAAACAGGGCTTGACCAAATCGCGCGACAAGATGGCCAAGTCGCTGGCCGGCGTATTCGGCGG
CGGCAAAATCGACGAAGATCTGTATGAAGAGTTGGAAACCGTGCTGATTACCAGCGACATGGGCATGGAAGCCACCAATT
ACCTGATGAAAGACGTGCGCAACCGCGTGAGCCTGAAAGGTCTGAAAGACGGCGAAGAATTGCGCGGCGCGCTGAAAGAG
GCGATTTACGATTTGATTAAGCCGTTGGAGCGGCCTTTGGTACTGCCCGAAAGCAAAGAGCCGTTTGTGATTATGCTGGC
CGGGATTAACGGCGCGGGCAAAACCACGTCCATCGGCAAGCTGGCGAAATATTTCCAGTCGCAGGGCAAATCCGTTTTGC
TGGCGGCGGGCGATACCTTCCGTGCGGCGGCGCGCGAGCAGTTGCAGGAATGGGGCGAGCGTAACAACGTCACCGTGATT
TCGCAATCGACGGGGGACTCGGCGGCGGTATGTTTCGATGCGGTGCAGGCCGCCAAAGCGCGCGGTATCGATATTGTGCT
GGCCGACACCGCCGGCCGCCTGCCGACCCAGCTGCACCTGATGGAAGAAATAAAAAAAGTGAAACGCGTGTTGCAGAAAG
CCATGCCCGACGCACCGCACGAAATCATCGTGGTGTTGGACGCGAATATCGGCCAAAACGCGGTCAACCAGGTGAAAGCG
TTTGACGAAGCCTTGGGCTTGACCGGCCTGATTGTGACGAAACTCGACGGCACGGCCAAAGGCGGCATTCTCGCAGCACT
CGCTTCCGACCGTCCGATTCCCGTGCGCTACATCGGCGTGGGCGAACGGATTGACGATTTGCGGCCGTTTGATGCAAGGG
CGTTTGTGGATGCGTTGTTGGATTAA

Domains

Predicted by InterproScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (176-241)

• SRP54-type protein, GTPase domain (SRP54) (261-460)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	78.068	83.08	0.649