Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   ACM660_RS08585 Genome accession   NZ_CP181170
Coordinates   1829914..1830870 (+) Length   318 a.a.
NCBI ID   WP_005204320.1    Uniprot ID   N9T4Y5
Organism   Acinetobacter sp. SEK541     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1824914..1835870
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACM660_RS08570 (ACM660_08570) - 1826115..1826840 (+) 726 WP_005204324.1 hypothetical protein -
  ACM660_RS08575 (ACM660_08575) - 1826910..1828367 (-) 1458 WP_005204322.1 DASS family sodium-coupled anion symporter -
  ACM660_RS08580 (ACM660_08580) - 1828638..1829621 (+) 984 WP_004806485.1 ion transporter -
  ACM660_RS08585 (ACM660_08585) ceuB 1829914..1830870 (+) 957 WP_005204320.1 ABC transporter permease Machinery gene
  ACM660_RS08590 (ACM660_08590) - 1830860..1831816 (+) 957 WP_004806488.1 iron chelate uptake ABC transporter family permease subunit -
  ACM660_RS08595 (ACM660_08595) - 1831807..1832571 (+) 765 WP_004806490.1 ABC transporter ATP-binding protein -
  ACM660_RS08600 (ACM660_08600) - 1832581..1833534 (+) 954 WP_004806492.1 siderophore ABC transporter substrate-binding protein -
  ACM660_RS08605 (ACM660_08605) - 1833630..1834238 (+) 609 WP_005204317.1 DUF2238 domain-containing protein -
  ACM660_RS08610 (ACM660_08610) - 1834262..1835482 (-) 1221 WP_005204315.1 MFS transporter -

Sequence

Protein


Download         Length: 318 a.a.        Molecular weight: 34723.84 Da        Isoelectric Point: 9.6681

>NTDB_id=1099385 ACM660_RS08585 WP_005204320.1 1829914..1830870(+) (ceuB) [Acinetobacter sp. SEK541]
MIKRRYLILLLLPLALISLFVGVGEMSLAGLWAGNPQDWQLFWTSRLPRLMAIVVAGAGLSVCGLIMQSLSRNRFVSPTT
AGLYDCARLGVLVSIILLPSASIFVNTGFAITVTLIGAMAFMSILATLKHRDTVFVPLVGMIFGSIISAFTTFIALQMDL
LQNLAGWLQGDFSTILNGQYELIYLSVPVLILIYIFANRFVLAGLGQDFATNLGLNYKQTLFLGLLLVSVITGVVIVTVG
AIPFLGLIVPNLVSLYLGDNIRRTLSHTALLGVLLVLLCDVFGRVVIYPYEVSVSLIMGIVGSVIFLWLLLRRYRYAT

Nucleotide


Download         Length: 957 bp        

>NTDB_id=1099385 ACM660_RS08585 WP_005204320.1 1829914..1830870(+) (ceuB) [Acinetobacter sp. SEK541]
ATGATTAAGCGGCGTTATCTAATTTTATTATTGCTTCCACTGGCATTGATTTCCTTATTTGTCGGTGTAGGCGAGATGAG
TCTTGCTGGTTTGTGGGCAGGCAATCCACAGGACTGGCAATTGTTCTGGACCAGTCGTTTGCCGCGACTTATGGCAATTG
TTGTGGCTGGCGCGGGCCTGAGCGTCTGCGGTTTGATTATGCAATCACTCAGTCGCAACCGTTTCGTTTCTCCAACCACC
GCAGGTTTATATGACTGTGCCCGTTTAGGTGTACTGGTTTCGATTATCTTGCTACCGAGTGCTTCAATTTTTGTAAATAC
AGGTTTTGCCATAACTGTGACACTGATCGGGGCAATGGCCTTTATGAGCATCCTGGCAACCCTCAAGCATCGAGATACCG
TCTTTGTTCCTCTGGTGGGGATGATTTTTGGCAGTATTATCTCAGCCTTTACCACCTTTATCGCCTTGCAAATGGATCTA
TTGCAGAACTTGGCAGGCTGGTTACAAGGTGACTTTTCCACCATTTTAAATGGTCAATATGAACTGATCTATCTTAGCGT
TCCTGTCTTGATTCTGATTTATATCTTTGCCAATCGTTTTGTCTTGGCAGGCTTGGGACAGGATTTTGCCACCAATCTTG
GACTGAATTATAAACAGACCTTATTTCTGGGTTTGTTACTGGTCTCGGTGATTACCGGTGTGGTGATTGTGACCGTGGGT
GCGATTCCGTTTCTTGGGCTGATCGTACCGAATTTGGTCAGCTTATATCTAGGTGACAATATCCGCCGAACCTTATCACA
TACGGCGCTCCTCGGTGTTTTGCTGGTTCTGCTCTGTGATGTTTTTGGTAGGGTAGTGATCTATCCCTATGAGGTGTCGG
TGAGCCTGATTATGGGCATCGTTGGTAGTGTGATTTTCCTGTGGTTATTGCTCAGGAGATACCGCTATGCCACATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(11-312)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB N9T4Y5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

48.882

98.428

0.481

Multiple sequence alignment