Detailed information    

insolico Bioinformatically predicted

Overview

Name   tonB2   Type   Machinery gene
Locus tag   ACM660_RS02765 Genome accession   NZ_CP181170
Coordinates   577911..578798 (+) Length   295 a.a.
NCBI ID   WP_004802579.1    Uniprot ID   N9RN98
Organism   Acinetobacter sp. SEK541     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 572911..583798
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACM660_RS02735 (ACM660_02735) - 573000..573509 (-) 510 WP_005200258.1 dihydrofolate reductase -
  ACM660_RS02740 (ACM660_02740) thyA 573535..574377 (-) 843 WP_005200256.1 thymidylate synthase -
  ACM660_RS02745 (ACM660_02745) - 574550..575374 (+) 825 WP_005200254.1 YwqG family protein -
  ACM660_RS02750 (ACM660_02750) - 575424..575999 (-) 576 WP_004655958.1 xanthine phosphoribosyltransferase -
  ACM660_RS02755 (ACM660_02755) - 576088..576792 (-) 705 WP_004802577.1 DUF3108 domain-containing protein -
  ACM660_RS02760 (ACM660_02760) - 576989..577669 (-) 681 WP_004802578.1 hypothetical protein -
  ACM660_RS02765 (ACM660_02765) tonB2 577911..578798 (+) 888 WP_004802579.1 energy transducer TonB Machinery gene
  ACM660_RS02770 (ACM660_02770) - 579086..581236 (+) 2151 WP_005200252.1 TonB-dependent siderophore receptor -
  ACM660_RS02775 (ACM660_02775) - 581311..581610 (-) 300 WP_005200249.1 antibiotic biosynthesis monooxygenase family protein -
  ACM660_RS02780 (ACM660_02780) ybeY 581622..582107 (-) 486 WP_005200247.1 rRNA maturation RNase YbeY -
  ACM660_RS02785 (ACM660_02785) - 582175..583251 (-) 1077 WP_004655946.1 PhoH family protein -

Sequence

Protein


Download         Length: 295 a.a.        Molecular weight: 33528.23 Da        Isoelectric Point: 9.1138

>NTDB_id=1099378 ACM660_RS02765 WP_004802579.1 577911..578798(+) (tonB2) [Acinetobacter sp. SEK541]
MWNKINFRSELSPYWWQDPIFVGAVALAMLLHGAVLAIQFTMPSPSDTSTKEIAVTVRPSTEKVKDADFLAQADQKGSGD
FREAHRMSSDMPAPMQADATTGEKELESLEKIQQKRELKFEEKVLMTVLSWQKQAEQSERKKTLDDLQSQFQAKAAMVAS
LEAQYLQRQQNFSRKQRIKTVDGIQAKQDASAAYLDKFRQKVELYGNRYYPDQAKQQRLAGEVRLMVILNAEGGIRAIRL
IESSGHAILDEAAKASVRRGAPFGPFDATMKKEISELRIIRTWRFDPVDAEFEVH

Nucleotide


Download         Length: 888 bp        

>NTDB_id=1099378 ACM660_RS02765 WP_004802579.1 577911..578798(+) (tonB2) [Acinetobacter sp. SEK541]
ATGTGGAATAAAATAAATTTTCGTTCAGAACTGTCCCCTTATTGGTGGCAAGATCCAATTTTTGTTGGGGCAGTGGCTTT
GGCGATGCTTTTGCATGGGGCGGTGTTGGCGATTCAATTTACCATGCCATCACCCTCTGACACTTCCACCAAAGAAATTG
CCGTCACCGTTCGTCCAAGTACTGAAAAAGTTAAAGATGCAGACTTTTTGGCGCAAGCTGATCAAAAAGGTTCGGGCGAT
TTCCGTGAAGCACATCGGATGTCGAGCGATATGCCTGCACCGATGCAAGCTGATGCAACTACAGGTGAAAAAGAGTTAGA
AAGTCTGGAGAAAATACAGCAAAAACGAGAGTTAAAATTCGAAGAAAAAGTGCTCATGACGGTTTTGAGTTGGCAAAAGC
AAGCCGAGCAGAGCGAACGTAAAAAAACCTTGGATGATCTACAAAGCCAGTTTCAAGCCAAAGCTGCCATGGTGGCGAGT
CTGGAAGCGCAATATTTACAGCGTCAACAAAATTTTAGCCGTAAACAACGGATTAAAACGGTCGATGGGATTCAGGCCAA
ACAAGATGCATCTGCTGCTTACCTAGATAAATTTCGCCAAAAAGTCGAGTTATACGGGAATCGCTATTATCCTGATCAAG
CCAAACAACAACGTTTGGCGGGTGAAGTGCGTCTCATGGTAATTTTGAATGCAGAAGGGGGAATCCGAGCGATTCGTCTC
ATTGAAAGTTCTGGGCATGCGATTTTAGACGAAGCTGCTAAAGCATCGGTTCGCCGTGGTGCACCATTTGGACCCTTTGA
TGCCACGATGAAAAAAGAAATCTCTGAGTTACGCATCATTCGGACTTGGCGTTTTGATCCAGTTGATGCTGAATTTGAAG
TGCACTAA

Domains

Predicted by InterproScan.

Gram-negative bacterial TonB protein C-terminal (TonB_C)

(207-272)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB N9RN98

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  tonB2 Acinetobacter baumannii D1279779

78.723

95.593

0.753

Multiple sequence alignment