Detailed information NTG0109866

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: ACGHM3_RS00820
• Genome accession: NZ_AP031496
• Coordinates: 183426..184490 (+)
• Length: 354 a.a.
• NCBI ID: WP_345416076.1
• Uniprot ID: A0AAV3TWW4
• Organism: Halioxenophilus aromaticivorans strain KU68F
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 178426..189490

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACGHM3_RS00800 (R50071_01620)	-	178869..180890 (-)	2022	WP_345416086.1	hydantoinase/oxoprolinase family protein	-
ACGHM3_RS00805 (R50071_01630)	mutM	181029..181853 (+)	825	WP_345416084.1	bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase	-
ACGHM3_RS00810 (R50071_01640)	coaD	181872..182351 (-)	480	WP_345416082.1	pantetheine-phosphate adenylyltransferase	-
ACGHM3_RS00815 (R50071_01650)	rsmD	182690..183325 (-)	636	WP_390517735.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
ACGHM3_RS00820 (R50071_01660)	pilA	183426..184490 (+)	1065	WP_345416076.1	signal recognition particle-docking protein FtsY	Machinery gene
ACGHM3_RS00825 (R50071_01670)	ftsE	184503..185210 (+)	708	WP_345416073.1	cell division ATP-binding protein FtsE	-
ACGHM3_RS00830 (R50071_01680)	ftsX	185203..186222 (+)	1020	WP_345416069.1	permease-like cell division protein FtsX	-
ACGHM3_RS00835 (R50071_01690)	rpoH	186438..187298 (+)	861	WP_345416067.1	RNA polymerase sigma factor RpoH	-
ACGHM3_RS00840 (R50071_01700)	-	187397..187780 (+)	384	WP_345416064.1	DUF423 domain-containing protein	-
ACGHM3_RS00845 (R50071_01710)	trmB	187805..188515 (+)	711	WP_345416061.1	tRNA (guanosine(46)-N7)-methyltransferase TrmB	-
ACGHM3_RS00850 (R50071_01720)	-	188529..189098 (+)	570	WP_345416058.1	hypothetical protein	-

Sequence

Protein

• Length: 354 a.a.
• Molecular weight: 37945.34 Da
• Isoelectric Point: 5.4980

>NTDB_id=109866 ACGHM3_RS00820 WP_345416076.1 183426..184490(+) (pilA) [Halioxenophilus aromaticivorans strain KU68F]
MFFKRKKKKPSEAEVPAAQSGIINAEPASEPPAQPEPTVSPVAEKPTKLGFFQRIKQGLSRTSSNLSNGLATLLLGKKEI
DEELLEEIETLLLTADIGIEATSEIIDELTASIERKQLTDGDAVYLALQRHLSQILQPVEQRLQIDSAKQPYVILVVGVN
GVGKTTTIGKLAKHLQNDGKKVVLAAGDTFRAAAVEQLQVWGERNSVPVIAQHTGADSASVIFDALQAAKSRGADVVIAD
TAGRLHNKSNLMDELSKVKRVMAKIDDSAPHEVLLVLDAGTGQNAINQAEQFNDAVGVSGLVLTKLDGTARGGIIFALSK
RFKIPVRFIGVGETADDLQPFAADAFIDALFDRS

Nucleotide

• Length: 1065 bp

>NTDB_id=109866 ACGHM3_RS00820 WP_345416076.1 183426..184490(+) (pilA) [Halioxenophilus aromaticivorans strain KU68F]
ATGTTTTTCAAACGCAAAAAGAAGAAACCCTCGGAAGCGGAAGTTCCAGCAGCCCAGTCCGGCATTATAAACGCCGAGCC
GGCTTCAGAACCACCGGCACAGCCCGAGCCCACGGTGTCACCGGTGGCGGAAAAGCCGACCAAGTTAGGCTTCTTTCAGC
GCATTAAGCAAGGGCTATCGCGCACCAGCAGTAACCTCAGCAACGGTTTAGCCACGTTATTGCTGGGCAAAAAAGAAATT
GATGAAGAGCTGCTGGAAGAAATCGAAACGTTATTATTAACGGCGGATATCGGCATTGAGGCGACCTCTGAAATCATTGA
TGAGCTCACCGCGAGCATTGAACGCAAACAGCTCACCGACGGTGATGCGGTGTATCTGGCCCTGCAGCGGCACCTTAGCC
AAATATTGCAGCCGGTGGAACAGCGCCTGCAGATCGACAGCGCCAAGCAGCCCTACGTCATTCTAGTCGTGGGTGTGAAC
GGTGTTGGCAAAACCACCACCATTGGCAAGTTGGCCAAACACCTGCAAAACGACGGTAAAAAAGTGGTGCTCGCCGCCGG
CGATACCTTCCGTGCTGCGGCGGTAGAACAGCTCCAGGTCTGGGGTGAGCGCAACAGCGTGCCGGTGATTGCACAACACA
CCGGCGCCGACAGCGCCTCGGTAATTTTTGATGCCTTACAGGCGGCCAAGTCCCGCGGTGCCGACGTTGTTATCGCCGAT
ACCGCCGGGCGCCTACACAACAAAAGTAACCTTATGGATGAGCTGTCCAAGGTTAAGCGAGTTATGGCCAAAATCGACGA
CTCCGCGCCCCACGAAGTGCTATTGGTGCTGGATGCGGGCACCGGTCAAAATGCGATTAATCAAGCCGAGCAGTTCAACG
ATGCGGTGGGTGTGTCCGGCCTGGTGCTCACCAAGCTCGACGGCACAGCCCGCGGCGGGATTATCTTTGCGCTCAGCAAG
CGGTTTAAGATTCCAGTGCGCTTCATCGGCGTAGGCGAAACCGCCGATGATCTCCAGCCGTTTGCCGCCGATGCCTTTAT
CGATGCGCTGTTTGATCGGAGCTAA

Domains

Predicted by InterproScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (67-131)

• SRP54-type protein, GTPase domain (SRP54) (152-351)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	50.575	98.305	0.497