Detailed information    

insolico Bioinformatically predicted

Overview


Name   vraS   Type   Regulator
Locus tag   ACM6AM_RS10160 Genome accession   NZ_CP181104
Coordinates   2041042..2042085 (-) Length   347 a.a.
NCBI ID   WP_416152902.1    Uniprot ID   -
Organism   Staphylococcus aureus strain AG21-0613     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 2036042..2047085
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACM6AM_RS10130 (ACM6AM_10135) - 2036463..2037719 (-) 1257 WP_001795108.1 aminopeptidase -
  ACM6AM_RS10135 (ACM6AM_10140) - 2037722..2037922 (-) 201 WP_000180460.1 DUF1128 family protein -
  ACM6AM_RS10140 (ACM6AM_10145) - 2038069..2038533 (+) 465 WP_000228666.1 low molecular weight protein-tyrosine-phosphatase -
  ACM6AM_RS10145 (ACM6AM_10150) - 2038540..2038815 (+) 276 WP_000428172.1 YtxH domain-containing protein -
  ACM6AM_RS10150 (ACM6AM_10155) - 2039093..2040310 (+) 1218 WP_000037075.1 YihY/virulence factor BrkB family protein -
  ACM6AM_RS10155 (ACM6AM_10160) vraR 2040423..2041052 (-) 630 WP_000153535.1 two-component system response regulator VraR Regulator
  ACM6AM_RS10160 (ACM6AM_10165) vraS 2041042..2042085 (-) 1044 WP_416152902.1 sensor histidine kinase Regulator
  ACM6AM_RS10165 (ACM6AM_10170) liaF 2042082..2042783 (-) 702 WP_001558031.1 cell wall-active antibiotics response protein LiaF -
  ACM6AM_RS10170 (ACM6AM_10175) - 2042798..2043184 (-) 387 WP_001110179.1 hypothetical protein -
  ACM6AM_RS10175 (ACM6AM_10180) map 2043401..2044159 (-) 759 WP_000636142.1 type I methionyl aminopeptidase -
  ACM6AM_RS10180 (ACM6AM_10185) - 2044690..2045676 (+) 987 WP_000999717.1 FUSC family protein -
  ACM6AM_RS10185 (ACM6AM_10190) - 2046107..2046520 (-) 414 WP_001557448.1 hypothetical protein -
  ACM6AM_RS10190 (ACM6AM_10195) - 2046549..2046659 (-) 111 WP_001790257.1 hypothetical protein -

Sequence


Protein


Download         Length: 347 a.a.        Molecular weight: 40045.46 Da        Isoelectric Point: 5.6449

>NTDB_id=1098323 ACM6AM_RS10160 WP_416152902.1 2041042..2042085(-) (vraS) [Staphylococcus aureus strain AG21-0613]
MNHYIRTIGSMLILVYSMLAAFLFIDKVFVNIIYFQGMFYTQIFGIPVFLFLNLIIILLCIIVGSVLAYKINQQNDWIKT
QIERSMEGETVGINDQNIEIYSETLDLYHTLVPLNQELHKLRLKTQNLTNENYNINDVKVKKIIEDERQRLARELHDSVS
QQLFAASMMLSAIKETKLEPPLDQQIPILEKMVQDSQLEMRALLLHLRPLGLKDKSLGEGIKDLVIDLQKKVPMKVVHEI
QDFKVPKGIEDHLFRITQEAISNTLRHSNGTKVTVELFNEDDYLLLRIQDNGKGFNVDEKLEQSYGLKNMRERALEIGAT
FHIVSLPDSGTRIEVKAPLNKEDSYDD

Nucleotide


Download         Length: 1044 bp        

>NTDB_id=1098323 ACM6AM_RS10160 WP_416152902.1 2041042..2042085(-) (vraS) [Staphylococcus aureus strain AG21-0613]
ATGAACCACTACATTAGAACAATTGGTTCAATGCTCATCTTAGTATATAGCATGCTAGCTGCATTTCTATTCATCGATAA
AGTTTTTGTAAATATCATCTATTTTCAAGGTATGTTTTATACACAAATATTCGGAATACCAGTCTTTTTATTTTTAAATC
TCATCATCATATTATTGTGTATTATTGTTGGTTCGGTACTCGCATACAAAATCAATCAGCAAAATGATTGGATTAAGACG
CAAATTGAGCGTTCAATGGAAGGCGAAACAGTTGGCATTAATGATCAAAATATAGAAATATATAGTGAAACGTTAGATTT
ATACCATACACTCGTACCTTTAAATCAAGAATTGCATAAGTTGCGACTTAAAACTCAAAACTTAACCAATGAAAATTATA
ATATTAATGATGTGAAAGTTAAAAAGATTATTGAAGATGAACGTCAAAGACTAGCTCGAGAACTTCACGATTCTGTTAGT
CAGCAACTTTTTGCGGCAAGTATGATGCTTTCTGCTATCAAAGAAACGAAGTTAGAACCACCATTAGACCAACAAATTCC
GATTTTAGAGAAAATGGTTCAAGATTCGCAGTTAGAAATGCGTGCTTTGCTGTTACATTTAAGACCGCTTGGTTTAAAAG
ACAAATCTTTAGGTGAGGGTATTAAAGATTTAGTTATTGATTTACAAAAAAAAGTGCCAATGAAAGTTGTGCATGAAATA
CAAGATTTTAAAGTGCCTAAAGGTATTGAAGATCATTTGTTCAGAATTACACAGGAAGCAATTTCGAATACATTGCGTCA
TTCAAACGGTACAAAAGTGACAGTAGAATTGTTTAATGAAGACGATTATTTATTGTTGAGAATTCAAGATAATGGTAAAG
GTTTTAATGTTGATGAAAAATTAGAACAAAGTTATGGACTTAAAAATATGCGTGAAAGAGCTTTGGAAATTGGTGCAACG
TTCCATATTGTATCATTGCCAGATTCAGGTACACGTATCGAGGTGAAAGCACCTTTAAATAAGGAGGATTCGTATGACGA
TTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraS Staphylococcus aureus N315

99.712

100

0.997


Multiple sequence alignment