Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   ACM1TL_RS15935 Genome accession   NZ_CP181080
Coordinates   3105358..3106308 (-) Length   316 a.a.
NCBI ID   WP_048394199.1    Uniprot ID   A0A2X0XHC4
Organism   Lysinibacillus capsici strain S2     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 3100358..3111308
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACM1TL_RS15910 (ACM1TL_15910) - 3101068..3101613 (+) 546 WP_048394207.1 hypothetical protein -
  ACM1TL_RS15915 (ACM1TL_15915) - 3102250..3102564 (-) 315 WP_115673153.1 antibiotic biosynthesis monooxygenase family protein -
  ACM1TL_RS15920 (ACM1TL_15920) - 3102566..3103591 (-) 1026 WP_054549615.1 siderophore ABC transporter substrate-binding protein -
  ACM1TL_RS15925 (ACM1TL_15925) - 3103654..3104415 (-) 762 WP_048394201.1 ABC transporter ATP-binding protein -
  ACM1TL_RS15930 (ACM1TL_15930) - 3104412..3105365 (-) 954 WP_004231949.1 iron chelate uptake ABC transporter family permease subunit -
  ACM1TL_RS15935 (ACM1TL_15935) ceuB 3105358..3106308 (-) 951 WP_048394199.1 ABC transporter permease Machinery gene
  ACM1TL_RS15940 (ACM1TL_15940) - 3106593..3107645 (-) 1053 WP_054549616.1 hypothetical protein -
  ACM1TL_RS15945 (ACM1TL_15945) menC 3107696..3108802 (-) 1107 WP_054549617.1 o-succinylbenzoate synthase -
  ACM1TL_RS15950 (ACM1TL_15950) - 3108824..3109648 (-) 825 WP_054549618.1 GNAT family N-acetyltransferase -
  ACM1TL_RS15955 (ACM1TL_15955) - 3109648..3110793 (-) 1146 WP_048394190.1 M20 peptidase aminoacylase family protein -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34810.02 Da        Isoelectric Point: 10.1980

>NTDB_id=1098052 ACM1TL_RS15935 WP_048394199.1 3105358..3106308(-) (ceuB) [Lysinibacillus capsici strain S2]
MKIRYLLTATVLLSIVSLFIGVVDIKPSDLLDFQSEEARLFLISRVPRLVAILLAGAGMSIAGLIMQSLSRNKFVSPTTA
GTLDATRLGVLISMMFFTNVTYFQKISFAFIFALAGTLLFMQILNRIKFKDAIFIPLIGLMFGNILSSVTTFFAYKANII
QNISAWLQGDFSLIMKGRYELLYVSVPILILAYIYANRFTVAGMGEDFAKNLGLSYKFVVNLGLVLVALISTTVVLTVGI
IPFLGLIIPNIISLFKGDNLAKTLPHTALLGMSFLLFCDILGRVLIFPYEIPISMTVGVIGSAIFLFMLFRGRAYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=1098052 ACM1TL_RS15935 WP_048394199.1 3105358..3106308(-) (ceuB) [Lysinibacillus capsici strain S2]
ATGAAAATAAGATATCTTTTAACAGCAACTGTTTTGCTGTCTATTGTGTCGCTCTTTATCGGAGTAGTAGATATTAAGCC
TAGCGACCTATTAGACTTCCAATCAGAAGAAGCTAGACTATTTTTAATTAGTCGTGTACCTAGACTTGTTGCAATCTTGC
TAGCGGGTGCAGGTATGAGTATTGCTGGTTTAATTATGCAAAGCTTAAGTAGGAATAAATTCGTTTCACCAACAACAGCT
GGTACATTAGATGCCACACGGTTGGGTGTATTGATTTCCATGATGTTCTTTACGAACGTTACGTATTTCCAAAAAATTTC
CTTCGCTTTCATATTTGCTTTAGCCGGCACATTACTATTTATGCAAATATTAAACCGAATTAAGTTTAAAGATGCGATTT
TTATACCGCTTATTGGCTTAATGTTTGGGAATATTTTGTCCTCTGTTACAACATTCTTTGCATATAAGGCGAATATTATC
CAAAACATTTCTGCATGGTTACAAGGAGATTTCTCATTAATCATGAAAGGCCGTTACGAACTGTTATACGTAAGTGTACC
AATACTCATTTTAGCTTACATTTACGCAAATCGTTTTACAGTAGCTGGGATGGGAGAGGATTTTGCAAAAAATCTTGGTC
TATCCTATAAATTTGTAGTCAATTTAGGCTTGGTGTTGGTAGCTCTTATCTCCACGACAGTGGTGTTAACAGTCGGTATC
ATTCCATTTCTTGGTTTGATTATTCCGAACATTATTTCTCTGTTTAAAGGTGATAATCTGGCAAAAACCTTGCCGCACAC
AGCATTACTTGGTATGTCATTCTTGTTATTCTGTGATATTTTAGGACGAGTACTGATTTTCCCTTATGAAATACCAATAA
GTATGACTGTTGGTGTAATTGGAAGTGCCATCTTCCTATTCATGTTGTTTAGGGGGAGAGCATATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2X0XHC4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.848

100

0.528

Multiple sequence alignment