Detailed information
Bioinformatically predicted
Overview
| Name | clpE | Type | Regulator |
| Locus tag | ABXG87_RS06935 | Genome accession | NZ_AP031488 |
| Coordinates | 1492972..1495242 (+) | Length | 756 a.a. |
| NCBI ID | WP_353551331.1 | Uniprot ID | - |
| Organism | Streptococcus salivarius strain NBRC 13956 | ||
| Function | repress competence development (at the early growth phase) (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1487972..1500242
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABXG87_RS06910 (Ssa13956_13020) | - | 1489074..1489550 (-) | 477 | WP_004182941.1 | ferrous iron transport protein A | - |
| ABXG87_RS06915 (Ssa13956_13030) | - | 1489722..1490456 (-) | 735 | WP_013990918.1 | amino acid ABC transporter ATP-binding protein | - |
| ABXG87_RS06920 (Ssa13956_13040) | - | 1490456..1491136 (-) | 681 | WP_002886081.1 | amino acid ABC transporter permease | - |
| ABXG87_RS06925 (Ssa13956_13050) | - | 1491450..1491680 (-) | 231 | WP_002885970.1 | DUF1797 family protein | - |
| ABXG87_RS06930 (Ssa13956_13060) | argF | 1491749..1492729 (-) | 981 | WP_353551330.1 | ornithine carbamoyltransferase | - |
| ABXG87_RS06935 (Ssa13956_13070) | clpE | 1492972..1495242 (+) | 2271 | WP_353551331.1 | ATP-dependent Clp protease ATP-binding subunit | Regulator |
| ABXG87_RS06940 (Ssa13956_13080) | - | 1495385..1495843 (+) | 459 | WP_013990921.1 | NUDIX hydrolase | - |
| ABXG87_RS06945 (Ssa13956_13090) | - | 1495853..1496155 (+) | 303 | WP_002885967.1 | DUF1827 family protein | - |
| ABXG87_RS06950 (Ssa13956_13100) | - | 1496201..1497163 (-) | 963 | WP_013990922.1 | Gfo/Idh/MocA family oxidoreductase | - |
| ABXG87_RS06955 (Ssa13956_13110) | - | 1497243..1497926 (-) | 684 | WP_045768969.1 | VTT domain-containing protein | - |
| ABXG87_RS06960 (Ssa13956_13120) | - | 1498009..1498629 (-) | 621 | WP_002885892.1 | DUF3862 domain-containing protein | - |
Sequence
Protein
Download Length: 756 a.a. Molecular weight: 84019.07 Da Isoelectric Point: 5.0564
>NTDB_id=109805 ABXG87_RS06935 WP_353551331.1 1492972..1495242(+) (clpE) [Streptococcus salivarius strain NBRC 13956]
MLCQNCNLNEASIHLYTNVNGNQQQVDLCQNCYKIMKSDPENPLNQFNQTGGSNFFDDFFSDLNNFRSSNGDLPNTPPTQ
EGGNRGNGGNTQGPGRPGGPRQQAPQQPQGLLEEFGINITDIARRGDIDPVIGRDEEIIRVIEILNRRTKNNPVLIGEPG
VGKTAVVEGLAQKIVDGSVPQKLQGKQVIRLDVVSLVQGTGIRGQFEERMQKLMEEIRQRQDVILFIDEIHEIVGAGNAG
DGNMDAGNILKPALARGELQLVGATTLNEYRIIEKDAALERRMQPVKVDEPTVEETITILRGIQPKYQDYHHVKYTDEAI
TAAAELSNRYIQDRFLPDKAIDLLDEAGSKMNLTLNFVDPKDIDKRLIEAENLKAQATRDEDFEKAAYFRDQIAKYKEMQ
KQTIKDQDMPVITEKHIEAIVEQKTNIPVGDLKEKEQSQLLSLADDLKSHVIGQDAAVDKIAKAIRRNRVGLGAPNRPIG
SFLFVGPTGVGKTELSKQLAIELFGSADSMIRFDMSEYMEKHAVAKLVGAPPGYVGYDEAGQLTEKVRRNPYSLILLDEV
EKAHPDVLHMFLQVLDDGRLTDGQGRTVSFKDSIIIMTSNAGTGKVEASVGFGAARENRTNSVLNQLGDFFSPEFMNRFD
GIIEFSALSKENLLTIVDLMLDNVNQRLANNGIHLSVTEKVKEKLVDLGYDPKMGARPLRRTIQDHIEDAITDFYLENPN
EKDLKAVMTSKGHITIKSAKKAEKTTQKAETSKETD
MLCQNCNLNEASIHLYTNVNGNQQQVDLCQNCYKIMKSDPENPLNQFNQTGGSNFFDDFFSDLNNFRSSNGDLPNTPPTQ
EGGNRGNGGNTQGPGRPGGPRQQAPQQPQGLLEEFGINITDIARRGDIDPVIGRDEEIIRVIEILNRRTKNNPVLIGEPG
VGKTAVVEGLAQKIVDGSVPQKLQGKQVIRLDVVSLVQGTGIRGQFEERMQKLMEEIRQRQDVILFIDEIHEIVGAGNAG
DGNMDAGNILKPALARGELQLVGATTLNEYRIIEKDAALERRMQPVKVDEPTVEETITILRGIQPKYQDYHHVKYTDEAI
TAAAELSNRYIQDRFLPDKAIDLLDEAGSKMNLTLNFVDPKDIDKRLIEAENLKAQATRDEDFEKAAYFRDQIAKYKEMQ
KQTIKDQDMPVITEKHIEAIVEQKTNIPVGDLKEKEQSQLLSLADDLKSHVIGQDAAVDKIAKAIRRNRVGLGAPNRPIG
SFLFVGPTGVGKTELSKQLAIELFGSADSMIRFDMSEYMEKHAVAKLVGAPPGYVGYDEAGQLTEKVRRNPYSLILLDEV
EKAHPDVLHMFLQVLDDGRLTDGQGRTVSFKDSIIIMTSNAGTGKVEASVGFGAARENRTNSVLNQLGDFFSPEFMNRFD
GIIEFSALSKENLLTIVDLMLDNVNQRLANNGIHLSVTEKVKEKLVDLGYDPKMGARPLRRTIQDHIEDAITDFYLENPN
EKDLKAVMTSKGHITIKSAKKAEKTTQKAETSKETD
Nucleotide
Download Length: 2271 bp
>NTDB_id=109805 ABXG87_RS06935 WP_353551331.1 1492972..1495242(+) (clpE) [Streptococcus salivarius strain NBRC 13956]
ATGCTCTGTCAAAACTGTAACCTTAATGAAGCTAGTATTCATTTGTATACCAATGTAAATGGTAATCAGCAACAAGTTGA
CCTCTGTCAAAATTGTTATAAAATCATGAAATCTGATCCAGAGAACCCCCTCAATCAATTCAATCAAACAGGAGGTTCCA
ACTTCTTCGACGATTTCTTCAGCGACCTAAATAACTTCCGTTCTTCTAACGGCGATCTTCCCAATACACCTCCAACACAA
GAAGGTGGTAACCGAGGAAACGGTGGCAATACACAAGGACCAGGACGTCCAGGAGGACCACGCCAACAAGCTCCTCAACA
GCCACAAGGTCTTCTTGAAGAGTTCGGCATTAACATCACTGACATCGCTCGTCGTGGAGACATTGATCCTGTTATTGGTC
GTGACGAGGAAATCATTCGTGTCATCGAAATTCTTAACCGCCGTACCAAGAACAACCCCGTCCTCATCGGTGAACCCGGT
GTCGGTAAGACTGCTGTCGTTGAAGGTCTAGCTCAAAAAATCGTTGACGGTAGCGTGCCACAAAAACTCCAAGGCAAACA
AGTCATTCGTCTCGATGTGGTCAGCCTGGTTCAAGGGACTGGTATCCGTGGCCAATTTGAAGAACGCATGCAAAAACTCA
TGGAAGAAATTCGTCAACGTCAGGATGTTATCCTATTTATTGATGAAATCCATGAAATCGTAGGAGCTGGTAATGCCGGG
GATGGCAATATGGATGCTGGAAACATCCTAAAACCTGCCCTTGCTCGTGGGGAACTTCAACTGGTCGGAGCAACTACACT
CAACGAATACCGCATCATCGAAAAAGATGCTGCCCTAGAGCGTCGTATGCAACCAGTTAAGGTTGACGAACCAACGGTTG
AGGAAACCATCACTATTTTGCGTGGTATCCAACCTAAATATCAAGACTACCACCATGTCAAATATACAGACGAAGCTATT
ACTGCAGCTGCAGAATTGTCCAACCGCTACATTCAAGACCGCTTCTTGCCAGACAAGGCCATCGACCTCCTCGATGAAGC
TGGTTCGAAGATGAACTTGACCCTCAATTTTGTTGATCCTAAAGATATCGACAAACGTTTGATTGAGGCTGAAAACCTCA
AGGCTCAAGCTACTCGTGACGAAGACTTTGAAAAAGCTGCCTATTTCCGTGATCAAATTGCCAAATACAAGGAAATGCAA
AAACAAACCATTAAAGACCAAGATATGCCTGTCATCACAGAAAAACATATCGAAGCCATTGTGGAACAAAAAACCAATAT
CCCTGTCGGTGATTTGAAAGAAAAAGAACAATCACAACTTCTTAGTCTTGCTGATGATCTTAAATCACATGTTATTGGAC
AAGATGCCGCAGTTGATAAGATTGCCAAAGCCATCCGTCGTAATCGTGTTGGATTGGGTGCACCAAATCGCCCAATTGGT
AGCTTCCTCTTCGTAGGTCCTACAGGAGTCGGTAAAACTGAACTCTCTAAACAATTGGCTATTGAACTCTTTGGTTCAGC
TGACAGTATGATTCGTTTCGATATGTCAGAATACATGGAAAAACATGCTGTCGCTAAATTGGTCGGTGCCCCTCCAGGAT
ACGTCGGTTACGACGAAGCTGGTCAGTTAACTGAAAAAGTCCGCCGTAATCCATATTCACTCATTCTTCTGGATGAGGTT
GAAAAAGCTCACCCAGACGTTCTTCACATGTTCCTCCAAGTTCTTGACGACGGTCGCTTGACTGATGGTCAAGGGCGAAC
TGTAAGTTTCAAGGATTCCATCATCATCATGACTTCAAATGCTGGTACAGGTAAAGTTGAAGCTAGCGTTGGCTTTGGAG
CTGCCCGTGAAAATCGTACCAATTCTGTGCTTAACCAGCTTGGAGATTTCTTCAGCCCTGAATTCATGAACCGCTTTGAC
GGTATTATCGAATTCTCTGCCCTTAGCAAAGAAAATCTCCTTACTATCGTTGACCTCATGCTTGATAATGTCAACCAACG
CTTGGCTAATAACGGTATCCACCTCAGTGTAACTGAGAAAGTTAAGGAAAAATTGGTTGACCTTGGTTACGATCCTAAGA
TGGGGGCTCGACCACTACGTCGTACCATCCAAGACCATATTGAAGATGCTATTACAGACTTCTACCTTGAAAATCCAAAT
GAAAAAGATCTCAAGGCAGTCATGACTTCAAAAGGGCACATCACCATTAAGTCTGCTAAAAAAGCCGAAAAAACTACTCA
GAAAGCTGAGACATCAAAAGAAACTGATTAA
ATGCTCTGTCAAAACTGTAACCTTAATGAAGCTAGTATTCATTTGTATACCAATGTAAATGGTAATCAGCAACAAGTTGA
CCTCTGTCAAAATTGTTATAAAATCATGAAATCTGATCCAGAGAACCCCCTCAATCAATTCAATCAAACAGGAGGTTCCA
ACTTCTTCGACGATTTCTTCAGCGACCTAAATAACTTCCGTTCTTCTAACGGCGATCTTCCCAATACACCTCCAACACAA
GAAGGTGGTAACCGAGGAAACGGTGGCAATACACAAGGACCAGGACGTCCAGGAGGACCACGCCAACAAGCTCCTCAACA
GCCACAAGGTCTTCTTGAAGAGTTCGGCATTAACATCACTGACATCGCTCGTCGTGGAGACATTGATCCTGTTATTGGTC
GTGACGAGGAAATCATTCGTGTCATCGAAATTCTTAACCGCCGTACCAAGAACAACCCCGTCCTCATCGGTGAACCCGGT
GTCGGTAAGACTGCTGTCGTTGAAGGTCTAGCTCAAAAAATCGTTGACGGTAGCGTGCCACAAAAACTCCAAGGCAAACA
AGTCATTCGTCTCGATGTGGTCAGCCTGGTTCAAGGGACTGGTATCCGTGGCCAATTTGAAGAACGCATGCAAAAACTCA
TGGAAGAAATTCGTCAACGTCAGGATGTTATCCTATTTATTGATGAAATCCATGAAATCGTAGGAGCTGGTAATGCCGGG
GATGGCAATATGGATGCTGGAAACATCCTAAAACCTGCCCTTGCTCGTGGGGAACTTCAACTGGTCGGAGCAACTACACT
CAACGAATACCGCATCATCGAAAAAGATGCTGCCCTAGAGCGTCGTATGCAACCAGTTAAGGTTGACGAACCAACGGTTG
AGGAAACCATCACTATTTTGCGTGGTATCCAACCTAAATATCAAGACTACCACCATGTCAAATATACAGACGAAGCTATT
ACTGCAGCTGCAGAATTGTCCAACCGCTACATTCAAGACCGCTTCTTGCCAGACAAGGCCATCGACCTCCTCGATGAAGC
TGGTTCGAAGATGAACTTGACCCTCAATTTTGTTGATCCTAAAGATATCGACAAACGTTTGATTGAGGCTGAAAACCTCA
AGGCTCAAGCTACTCGTGACGAAGACTTTGAAAAAGCTGCCTATTTCCGTGATCAAATTGCCAAATACAAGGAAATGCAA
AAACAAACCATTAAAGACCAAGATATGCCTGTCATCACAGAAAAACATATCGAAGCCATTGTGGAACAAAAAACCAATAT
CCCTGTCGGTGATTTGAAAGAAAAAGAACAATCACAACTTCTTAGTCTTGCTGATGATCTTAAATCACATGTTATTGGAC
AAGATGCCGCAGTTGATAAGATTGCCAAAGCCATCCGTCGTAATCGTGTTGGATTGGGTGCACCAAATCGCCCAATTGGT
AGCTTCCTCTTCGTAGGTCCTACAGGAGTCGGTAAAACTGAACTCTCTAAACAATTGGCTATTGAACTCTTTGGTTCAGC
TGACAGTATGATTCGTTTCGATATGTCAGAATACATGGAAAAACATGCTGTCGCTAAATTGGTCGGTGCCCCTCCAGGAT
ACGTCGGTTACGACGAAGCTGGTCAGTTAACTGAAAAAGTCCGCCGTAATCCATATTCACTCATTCTTCTGGATGAGGTT
GAAAAAGCTCACCCAGACGTTCTTCACATGTTCCTCCAAGTTCTTGACGACGGTCGCTTGACTGATGGTCAAGGGCGAAC
TGTAAGTTTCAAGGATTCCATCATCATCATGACTTCAAATGCTGGTACAGGTAAAGTTGAAGCTAGCGTTGGCTTTGGAG
CTGCCCGTGAAAATCGTACCAATTCTGTGCTTAACCAGCTTGGAGATTTCTTCAGCCCTGAATTCATGAACCGCTTTGAC
GGTATTATCGAATTCTCTGCCCTTAGCAAAGAAAATCTCCTTACTATCGTTGACCTCATGCTTGATAATGTCAACCAACG
CTTGGCTAATAACGGTATCCACCTCAGTGTAACTGAGAAAGTTAAGGAAAAATTGGTTGACCTTGGTTACGATCCTAAGA
TGGGGGCTCGACCACTACGTCGTACCATCCAAGACCATATTGAAGATGCTATTACAGACTTCTACCTTGAAAATCCAAAT
GAAAAAGATCTCAAGGCAGTCATGACTTCAAAAGGGCACATCACCATTAAGTCTGCTAAAAAAGCCGAAAAAACTACTCA
GAAAGCTGAGACATCAAAAGAAACTGATTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpE | Streptococcus mutans UA159 |
85.638 |
99.471 |
0.852 |
| clpE | Streptococcus pneumoniae Rx1 |
83.267 |
99.603 |
0.829 |
| clpE | Streptococcus pneumoniae D39 |
83.267 |
99.603 |
0.829 |
| clpE | Streptococcus pneumoniae R6 |
83.267 |
99.603 |
0.829 |
| clpE | Streptococcus pneumoniae TIGR4 |
83.267 |
99.603 |
0.829 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
77.249 |
100 |
0.772 |
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
51.698 |
85.714 |
0.443 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
45.884 |
86.772 |
0.398 |
| clpC | Streptococcus pneumoniae Rx1 |
47.2 |
82.672 |
0.39 |
| clpC | Streptococcus pneumoniae D39 |
47.2 |
82.672 |
0.39 |
| clpC | Streptococcus pneumoniae TIGR4 |
47.04 |
82.672 |
0.389 |
| clpC | Streptococcus thermophilus LMD-9 |
46.88 |
82.672 |
0.388 |
| clpC | Streptococcus thermophilus LMG 18311 |
46.56 |
82.672 |
0.385 |
| clpC | Streptococcus mutans UA159 |
46.326 |
82.804 |
0.384 |