Detailed information
Bioinformatically predicted
Overview
| Name | tsaP | Type | Machinery gene |
| Locus tag | HW02_RS00120 | Genome accession | NZ_CP008865 |
| Coordinates | 28493..29518 (+) | Length | 341 a.a. |
| NCBI ID | WP_003097294.1 | Uniprot ID | A0A0H2ZJL6 |
| Organism | Pseudomonas aeruginosa strain S86968 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 23493..34518
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HW02_RS00095 (HW02_13125) | - | 23682..23999 (-) | 318 | WP_003120685.1 | tetratricopeptide repeat protein | - |
| HW02_RS00100 (HW02_13130) | trkA | 24148..25521 (-) | 1374 | WP_003107053.1 | Trk system potassium transporter TrkA | - |
| HW02_RS00105 (HW02_13135) | rsmB | 25548..26852 (-) | 1305 | WP_003122291.1 | 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB | - |
| HW02_RS00110 (HW02_13140) | fmt | 26849..27793 (-) | 945 | WP_010793609.1 | methionyl-tRNA formyltransferase | - |
| HW02_RS00115 (HW02_13145) | def | 27848..28354 (-) | 507 | WP_003107059.1 | peptide deformylase | - |
| HW02_RS00120 (HW02_13150) | tsaP | 28493..29518 (+) | 1026 | WP_003097294.1 | LysM peptidoglycan-binding domain-containing protein | Machinery gene |
| HW02_RS00125 (HW02_13155) | dprA | 29653..30741 (+) | 1089 | WP_003118479.1 | DNA-processing protein DprA | Machinery gene |
| HW02_RS00130 (HW02_13160) | - | 30782..31339 (+) | 558 | WP_016561457.1 | L-threonylcarbamoyladenylate synthase | - |
| HW02_RS00135 (HW02_13165) | - | 31349..32326 (-) | 978 | WP_003097303.1 | NADPH:quinone reductase | - |
| HW02_RS00140 (HW02_13170) | hemF | 32517..33434 (+) | 918 | WP_003097311.1 | oxygen-dependent coproporphyrinogen oxidase | - |
| HW02_RS00145 (HW02_13175) | aroE | 33492..34316 (+) | 825 | WP_003111201.1 | shikimate dehydrogenase | - |
Sequence
Protein
Download Length: 341 a.a. Molecular weight: 37586.01 Da Isoelectric Point: 9.3358
>NTDB_id=109787 HW02_RS00120 WP_003097294.1 28493..29518(+) (tsaP) [Pseudomonas aeruginosa strain S86968]
MRKSLVALLLLAASGLAQAQVDLREGHPDRYTVVRGDTLWDISGKFLRQPWKWPELWHANPQIQNPHLIYPGDTLSLVYV
DGQPRLVLNRGESRGTIKLSPKIRSTPIAEAIPTIPLDKINSFLLANRIVDDEKTFTSAPYIVAGNAERIVSGTGDRIYA
RGKFADGQPAYGIFRQGKVYIDPKTKEVLGINADDIGGGEVVATEGDVATLALTRTTQEVRLGDRLFPTEERAVNSTFMP
GEPSREVKGEIIDVPRGVTQIGQFDVVTLNRGQRDGLAEGNVLAIYKVGETVRDRVTGESVKIPDERAGLLMVFRTYKKL
SYALVLMASRPLSVTDRVQNP
MRKSLVALLLLAASGLAQAQVDLREGHPDRYTVVRGDTLWDISGKFLRQPWKWPELWHANPQIQNPHLIYPGDTLSLVYV
DGQPRLVLNRGESRGTIKLSPKIRSTPIAEAIPTIPLDKINSFLLANRIVDDEKTFTSAPYIVAGNAERIVSGTGDRIYA
RGKFADGQPAYGIFRQGKVYIDPKTKEVLGINADDIGGGEVVATEGDVATLALTRTTQEVRLGDRLFPTEERAVNSTFMP
GEPSREVKGEIIDVPRGVTQIGQFDVVTLNRGQRDGLAEGNVLAIYKVGETVRDRVTGESVKIPDERAGLLMVFRTYKKL
SYALVLMASRPLSVTDRVQNP
Nucleotide
Download Length: 1026 bp
>NTDB_id=109787 HW02_RS00120 WP_003097294.1 28493..29518(+) (tsaP) [Pseudomonas aeruginosa strain S86968]
ATGAGGAAATCACTAGTCGCCCTTCTGCTCCTTGCCGCGAGCGGTCTGGCGCAGGCCCAGGTCGACCTCAGGGAAGGGCA
TCCGGACCGCTACACGGTGGTCAGGGGCGATACCCTGTGGGACATCTCGGGGAAATTCCTCCGCCAGCCATGGAAGTGGC
CGGAACTCTGGCACGCCAACCCGCAGATCCAGAATCCACATCTGATCTACCCCGGCGACACCCTCAGCCTGGTCTACGTC
GATGGCCAGCCGCGCCTGGTGCTGAACCGTGGCGAATCGCGCGGGACCATCAAGCTGTCGCCGAAGATCCGCAGCACGCC
GATCGCCGAGGCCATCCCGACCATCCCGCTGGACAAGATCAACAGCTTCCTGCTGGCCAACCGCATCGTCGATGACGAGA
AGACCTTCACCAGTGCGCCGTACATCGTCGCCGGCAACGCCGAGCGGATCGTCAGCGGCACCGGCGACCGCATCTACGCT
CGCGGCAAGTTCGCCGACGGCCAGCCGGCCTATGGCATCTTCCGCCAGGGCAAGGTCTACATCGATCCGAAGACCAAGGA
AGTCCTCGGCATCAACGCCGACGACATCGGCGGCGGCGAGGTGGTGGCCACCGAAGGCGACGTCGCGACCCTGGCGCTGA
CCCGCACCACCCAGGAAGTGCGCCTGGGCGACCGCCTGTTCCCCACCGAGGAGCGTGCGGTGAATTCCACCTTCATGCCC
GGCGAGCCGAGCCGCGAGGTGAAGGGCGAAATCATCGACGTACCGCGCGGCGTGACCCAGATCGGCCAGTTCGACGTGGT
CACCCTGAACCGTGGCCAGCGCGACGGGCTGGCCGAGGGCAACGTGCTGGCGATCTACAAGGTCGGCGAGACGGTGCGCG
ACCGCGTTACCGGTGAGTCGGTGAAGATTCCCGACGAACGCGCCGGCCTGCTGATGGTGTTCCGTACCTACAAGAAGCTG
AGCTACGCCCTGGTTCTGATGGCCAGCAGGCCGCTCTCGGTAACCGACAGGGTGCAGAATCCCTGA
ATGAGGAAATCACTAGTCGCCCTTCTGCTCCTTGCCGCGAGCGGTCTGGCGCAGGCCCAGGTCGACCTCAGGGAAGGGCA
TCCGGACCGCTACACGGTGGTCAGGGGCGATACCCTGTGGGACATCTCGGGGAAATTCCTCCGCCAGCCATGGAAGTGGC
CGGAACTCTGGCACGCCAACCCGCAGATCCAGAATCCACATCTGATCTACCCCGGCGACACCCTCAGCCTGGTCTACGTC
GATGGCCAGCCGCGCCTGGTGCTGAACCGTGGCGAATCGCGCGGGACCATCAAGCTGTCGCCGAAGATCCGCAGCACGCC
GATCGCCGAGGCCATCCCGACCATCCCGCTGGACAAGATCAACAGCTTCCTGCTGGCCAACCGCATCGTCGATGACGAGA
AGACCTTCACCAGTGCGCCGTACATCGTCGCCGGCAACGCCGAGCGGATCGTCAGCGGCACCGGCGACCGCATCTACGCT
CGCGGCAAGTTCGCCGACGGCCAGCCGGCCTATGGCATCTTCCGCCAGGGCAAGGTCTACATCGATCCGAAGACCAAGGA
AGTCCTCGGCATCAACGCCGACGACATCGGCGGCGGCGAGGTGGTGGCCACCGAAGGCGACGTCGCGACCCTGGCGCTGA
CCCGCACCACCCAGGAAGTGCGCCTGGGCGACCGCCTGTTCCCCACCGAGGAGCGTGCGGTGAATTCCACCTTCATGCCC
GGCGAGCCGAGCCGCGAGGTGAAGGGCGAAATCATCGACGTACCGCGCGGCGTGACCCAGATCGGCCAGTTCGACGTGGT
CACCCTGAACCGTGGCCAGCGCGACGGGCTGGCCGAGGGCAACGTGCTGGCGATCTACAAGGTCGGCGAGACGGTGCGCG
ACCGCGTTACCGGTGAGTCGGTGAAGATTCCCGACGAACGCGCCGGCCTGCTGATGGTGTTCCGTACCTACAAGAAGCTG
AGCTACGCCCTGGTTCTGATGGCCAGCAGGCCGCTCTCGGTAACCGACAGGGTGCAGAATCCCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| tsaP | Acinetobacter baumannii D1279779 |
36.512 |
100 |
0.393 |