Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   ABXG87_RS01080 Genome accession   NZ_AP031488
Coordinates   199126..200388 (+) Length   420 a.a.
NCBI ID   WP_070579709.1    Uniprot ID   -
Organism   Streptococcus salivarius strain NBRC 13956     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 194126..205388
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABXG87_RS01055 (Ssa13956_01570) - 194511..196088 (+) 1578 WP_175060428.1 ABC transporter ATP-binding protein -
  ABXG87_RS01060 (Ssa13956_01580) - 196244..196960 (+) 717 WP_002883635.1 YebC/PmpR family DNA-binding transcriptional regulator -
  ABXG87_RS01065 (Ssa13956_01590) - 197086..197424 (+) 339 WP_038675213.1 preprotein translocase subunit YajC -
  ABXG87_RS01070 (Ssa13956_01600) - 197553..198302 (+) 750 WP_002886457.1 isoprenyl transferase -
  ABXG87_RS01075 (Ssa13956_01610) - 198315..199109 (+) 795 WP_070579707.1 phosphatidate cytidylyltransferase -
  ABXG87_RS01080 (Ssa13956_01620) eeP 199126..200388 (+) 1263 WP_070579709.1 RIP metalloprotease RseP Regulator
  ABXG87_RS01085 (Ssa13956_01630) - 200459..202321 (+) 1863 WP_141751054.1 proline--tRNA ligase -
  ABXG87_RS01090 (Ssa13956_01640) - 202803..204743 (+) 1941 WP_002883690.1 ABC transporter substrate binding protein -

Sequence


Protein


Download         Length: 420 a.a.        Molecular weight: 45834.24 Da        Isoelectric Point: 5.8010

>NTDB_id=109770 ABXG87_RS01080 WP_070579709.1 199126..200388(+) (eeP) [Streptococcus salivarius strain NBRC 13956]
MKAIITFLLIFCVIVVFHEFGHFFFAKRSGILVREFAIGMGPKIFAHTGKDGTVYTIRILPLGGYVRMAGWGEDTTEIKT
GSPASLTIGSDGKVRRINLSDRQIDQTALPMNVTAYDLEDKLTITGLVLDETKTYEVDHDATIVEEDGTELRIAPKDVQY
QNASIWGRLITNFAGPMNNFILGVLVFIILAFVQGGVQDISTNRIQVADGGAAQVAGLKNGDAIEAINKDKVTDWDSLKE
ALTENTQKFSKGDSLSVTVKRSNGQEETISVKPQENQGSYFLGISPALKTGLKDKIFGGFQMAWEGAFKILVALKGLITN
FSLNKLGGPVAMFQMSAQASENGLISILNLMGMLSINLGIFNLIPIPALDGGKIVMNIIEAIRRKPLNQEIESYITLAGV
AIMVVLMIAVTWNDIMRAFF

Nucleotide


Download         Length: 1263 bp        

>NTDB_id=109770 ABXG87_RS01080 WP_070579709.1 199126..200388(+) (eeP) [Streptococcus salivarius strain NBRC 13956]
ATGAAAGCTATTATTACCTTTTTACTGATTTTCTGTGTGATTGTCGTCTTCCATGAGTTTGGTCATTTCTTTTTCGCCAA
ACGCTCAGGGATTTTGGTTCGTGAATTTGCCATTGGTATGGGACCGAAAATTTTTGCACATACAGGTAAGGATGGTACCG
TTTATACTATCCGTATCCTCCCTTTGGGTGGTTATGTCCGTATGGCTGGTTGGGGTGAAGATACAACTGAGATTAAAACA
GGTAGCCCTGCCAGTCTAACGATTGGATCAGATGGTAAGGTAAGACGTATCAACCTTTCGGATCGCCAGATTGATCAGAC
GGCTTTACCTATGAACGTCACTGCCTATGATTTGGAGGATAAGTTAACCATTACAGGTCTAGTCCTAGATGAGACCAAGA
CCTATGAGGTTGATCATGATGCCACTATCGTTGAGGAGGATGGTACAGAACTTCGTATCGCTCCTAAGGATGTCCAATAT
CAAAATGCAAGCATTTGGGGACGTTTAATTACCAACTTTGCTGGTCCTATGAATAACTTCATTCTTGGGGTGCTTGTCTT
TATTATCTTAGCCTTTGTTCAGGGTGGTGTTCAAGATATATCGACCAACCGTATCCAGGTAGCCGATGGAGGCGCTGCTC
AGGTGGCAGGCTTGAAAAATGGTGATGCCATCGAGGCTATCAATAAGGACAAGGTTACTGATTGGGACAGCTTGAAGGAA
GCATTGACAGAGAATACCCAAAAATTCTCCAAAGGTGACAGCCTTTCTGTGACAGTTAAGAGAAGTAACGGTCAGGAAGA
AACAATCTCTGTTAAACCTCAGGAGAACCAAGGTAGCTACTTTTTGGGTATTTCTCCTGCTTTAAAAACAGGTCTTAAAG
ATAAGATTTTTGGTGGTTTCCAAATGGCTTGGGAAGGGGCCTTCAAAATTCTCGTAGCACTTAAAGGGCTTATCACCAAC
TTTAGTTTGAATAAACTTGGTGGACCGGTTGCTATGTTCCAGATGTCTGCCCAGGCTTCAGAAAATGGCTTGATTTCCAT
TCTTAACCTTATGGGGATGCTCTCAATTAACCTGGGAATTTTCAATCTTATCCCAATTCCAGCCCTTGACGGTGGAAAAA
TTGTTATGAATATTATTGAAGCCATTCGTCGTAAACCACTTAATCAAGAAATTGAAAGCTATATTACACTTGCAGGTGTT
GCTATCATGGTTGTTCTTATGATTGCAGTCACTTGGAATGATATTATGCGTGCTTTCTTTTAA

Domains


Predicted by InterproScan.

(205-272)

(6-406)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

95

100

0.95

  eeP Streptococcus thermophilus LMG 18311

94.762

100

0.948


Multiple sequence alignment