Detailed information NTG0109767

Bioinformatically predicted

Overview

• Name: amiF
• Type: Regulator
• Locus tag: ABXG87_RS00985
• Genome accession: NZ_AP031488
• Coordinates: 179045..179974 (+)
• Length: 309 a.a.
• NCBI ID: WP_045771698.1
• Uniprot ID: A0AAP3Q7D9
• Organism: Streptococcus salivarius strain NBRC 13956
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 174045..184974

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABXG87_RS00965 (Ssa13956_01380)	-	174256..175902 (+)	1647	WP_045769209.1	peptide ABC transporter substrate-binding protein	-
ABXG87_RS00970 (Ssa13956_01390)	-	176033..176947 (+)	915	WP_045001977.1	ABC transporter permease	-
ABXG87_RS00975 (Ssa13956_01400)	-	176955..177989 (+)	1035	WP_045769210.1	ABC transporter permease	-
ABXG87_RS00980 (Ssa13956_01410)	oppD	178003..179043 (+)	1041	WP_014633662.1	ABC transporter ATP-binding protein	Regulator
ABXG87_RS00985 (Ssa13956_01420)	amiF	179045..179974 (+)	930	WP_045771698.1	ATP-binding cassette domain-containing protein	Regulator
ABXG87_RS00990 (Ssa13956_01430)	-	180101..180460 (+)	360	WP_002883594.1	hypothetical protein	-
ABXG87_RS00995 (Ssa13956_01440)	hslO	180540..181406 (+)	867	WP_045769213.1	Hsp33 family molecular chaperone HslO	-
ABXG87_RS01000 (Ssa13956_01450)	dusB	181399..182376 (+)	978	WP_002883588.1	tRNA dihydrouridine synthase DusB	-
ABXG87_RS01005 (Ssa13956_01460)	-	182540..182983 (+)	444	WP_049553904.1	zinc-dependent MarR family transcriptional regulator	-
ABXG87_RS01010 (Ssa13956_01470)	-	182985..183692 (+)	708	WP_002883613.1	metal ABC transporter ATP-binding protein	-
ABXG87_RS01015 (Ssa13956_01480)	-	183685..184497 (+)	813	WP_111686463.1	metal ABC transporter permease	-

Sequence

Protein

• Length: 309 a.a.
• Molecular weight: 34941.72 Da
• Isoelectric Point: 6.5085

>NTDB_id=109767 ABXG87_RS00985 WP_045771698.1 179045..179974(+) (amiF) [Streptococcus salivarius strain NBRC 13956]
MTQERKKLVELKNVSLTFNKGKSNEVKAIDDVSFDIYEGEIFGLVGESGSGKTTIGRSILKLYDIDSGTVTFAGNDISSL
KGKDLHDFRKTAQMIFQDPQASLNGRMKIRDIIAEGIDIHKLAKSKEEREAKVKELINLVGLNEDHLSRYPHEFSGGQRQ
RIGIARALAVNPHFIVADEPISALDVSIQAQVVNLMQKLQHEQGLTYLFIAHDLSMVKYISDRIGVMHWGKLLEVGPADE
IYHNPIHPYTKSLLSAIPEPDPERERKRQHLIYDSSIENDGEKRQMYEIRPGHFVYATEAEAKNYKEEA

Nucleotide

• Length: 930 bp

>NTDB_id=109767 ABXG87_RS00985 WP_045771698.1 179045..179974(+) (amiF) [Streptococcus salivarius strain NBRC 13956]
ATGACACAAGAACGTAAGAAGTTAGTAGAATTAAAAAATGTGTCTCTAACTTTTAATAAAGGAAAATCAAACGAAGTTAA
GGCCATTGATGACGTTAGCTTTGATATCTATGAGGGCGAAATTTTCGGCCTAGTTGGAGAATCTGGTTCAGGTAAAACGA
CCATTGGGCGTTCTATTCTAAAGCTTTATGATATTGATTCGGGTACTGTTACCTTTGCTGGTAATGATATATCAAGTTTA
AAAGGGAAAGACCTTCATGATTTCCGTAAGACAGCTCAGATGATTTTTCAAGATCCTCAAGCTAGTCTTAATGGACGAAT
GAAGATTCGTGATATTATTGCTGAGGGGATTGATATTCATAAATTGGCTAAATCCAAGGAAGAACGTGAAGCCAAGGTTA
AAGAACTTATTAATTTGGTGGGATTAAATGAAGATCACTTATCAAGATATCCTCATGAATTTTCTGGTGGTCAGCGTCAA
AGAATTGGTATTGCGCGTGCTTTAGCGGTCAATCCTCATTTTATTGTAGCAGACGAACCTATCTCTGCTTTAGATGTTTC
TATTCAAGCACAAGTAGTTAATTTGATGCAAAAGTTACAACACGAACAGGGGTTAACTTATTTGTTTATTGCACATGACT
TGTCAATGGTTAAATATATATCCGATCGTATTGGTGTAATGCATTGGGGTAAACTTCTTGAGGTAGGACCAGCAGATGAG
ATTTACCATAATCCGATCCATCCTTATACAAAGAGTTTATTGTCTGCCATTCCAGAACCAGACCCAGAAAGAGAGCGTAA
ACGTCAACATTTGATTTATGATTCCTCTATTGAAAATGATGGGGAAAAGAGACAAATGTATGAAATCCGACCAGGACATT
TTGTTTATGCTACAGAAGCAGAGGCTAAAAATTATAAAGAAGAAGCCTAA

Domains

Predicted by InterproScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-265)

• ABC transporter (ABC_tran) (30-181)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiF	Streptococcus thermophilus LMD-9	54.754	98.706	0.54
amiF	Streptococcus thermophilus LMG 18311	54.426	98.706	0.537
amiF	Streptococcus salivarius strain HSISS4	54.098	98.706	0.534