Detailed information NTG0109766

Bioinformatically predicted

Overview

• Name: oppD
• Type: Regulator
• Locus tag: ABXG87_RS00980
• Genome accession: NZ_AP031488
• Coordinates: 178003..179043 (+)
• Length: 346 a.a.
• NCBI ID: WP_014633662.1
• Uniprot ID: -
• Organism: Streptococcus salivarius strain NBRC 13956
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 173003..184043

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABXG87_RS00965 (Ssa13956_01380)	-	174256..175902 (+)	1647	WP_045769209.1	peptide ABC transporter substrate-binding protein	-
ABXG87_RS00970 (Ssa13956_01390)	-	176033..176947 (+)	915	WP_045001977.1	ABC transporter permease	-
ABXG87_RS00975 (Ssa13956_01400)	-	176955..177989 (+)	1035	WP_045769210.1	ABC transporter permease	-
ABXG87_RS00980 (Ssa13956_01410)	oppD	178003..179043 (+)	1041	WP_014633662.1	ABC transporter ATP-binding protein	Regulator
ABXG87_RS00985 (Ssa13956_01420)	amiF	179045..179974 (+)	930	WP_045771698.1	ATP-binding cassette domain-containing protein	Regulator
ABXG87_RS00990 (Ssa13956_01430)	-	180101..180460 (+)	360	WP_002883594.1	hypothetical protein	-
ABXG87_RS00995 (Ssa13956_01440)	hslO	180540..181406 (+)	867	WP_045769213.1	Hsp33 family molecular chaperone HslO	-
ABXG87_RS01000 (Ssa13956_01450)	dusB	181399..182376 (+)	978	WP_002883588.1	tRNA dihydrouridine synthase DusB	-
ABXG87_RS01005 (Ssa13956_01460)	-	182540..182983 (+)	444	WP_049553904.1	zinc-dependent MarR family transcriptional regulator	-
ABXG87_RS01010 (Ssa13956_01470)	-	182985..183692 (+)	708	WP_002883613.1	metal ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 346 a.a.
• Molecular weight: 38554.29 Da
• Isoelectric Point: 5.2741

>NTDB_id=109766 ABXG87_RS00980 WP_014633662.1 178003..179043(+) (oppD) [Streptococcus salivarius strain NBRC 13956]
MTKETILSVKNLHVNFHTYAGEVKAIRDVNFDLKKGETLAIVGESGSGKSVTTRTLMGLSDKNAEVIGEITFKGRNMQTL
KEQDWVEVRGNDIAMIFQDPMTSLDPTMKIGHQIAEPIMLHAKVSQKEALEMALQLMKDVGIPNAEEHINDYPHQWSGGM
RQRAVIAIALAADPEILIADEPTTALDVTIQAQILHLMKKIQEERNSSIIFITHDLGVVAGMADRVAVMYAGKIVEYGTV
DEVFYNPKHPYTWGLLNSMPTTETESGSLEAIPGTPPDLLYPPKGDAFAARNAFALDIDYQEEPPMFKVSDTHFAATWLL
DERAPKVTPPSPILKRWEKWSKMKEK

Nucleotide

• Length: 1041 bp

>NTDB_id=109766 ABXG87_RS00980 WP_014633662.1 178003..179043(+) (oppD) [Streptococcus salivarius strain NBRC 13956]
ATGACGAAAGAAACGATTTTAAGTGTAAAAAATCTCCATGTTAATTTTCATACTTACGCTGGAGAAGTAAAAGCGATTCG
TGATGTTAATTTTGACTTAAAAAAAGGTGAAACATTAGCGATTGTTGGTGAGTCTGGTTCAGGAAAATCTGTAACGACAA
GGACACTAATGGGGCTATCAGATAAAAATGCTGAGGTAATTGGAGAAATTACCTTTAAGGGACGCAATATGCAAACCTTG
AAGGAGCAAGATTGGGTTGAAGTTCGTGGAAATGATATTGCTATGATTTTTCAGGATCCTATGACCAGCCTTGACCCTAC
TATGAAAATTGGACACCAAATTGCTGAGCCTATCATGCTTCATGCCAAGGTATCTCAGAAGGAAGCCTTAGAAATGGCTT
TACAATTAATGAAAGATGTTGGTATACCTAATGCTGAAGAACATATAAATGATTATCCTCATCAATGGTCAGGAGGAATG
CGTCAAAGAGCAGTAATTGCCATTGCTCTAGCGGCAGATCCTGAAATTTTGATTGCTGATGAGCCTACGACAGCCTTAGA
TGTAACGATTCAAGCACAAATTCTTCATCTTATGAAAAAAATTCAAGAAGAGCGTAATTCATCTATTATTTTTATTACTC
ATGACTTGGGCGTTGTCGCTGGTATGGCTGATCGTGTAGCGGTAATGTATGCCGGTAAAATTGTGGAATATGGTACTGTG
GATGAGGTTTTCTACAATCCGAAACACCCATACACGTGGGGGCTTCTTAACTCAATGCCTACAACAGAAACAGAATCTGG
TAGTCTAGAAGCTATTCCAGGAACTCCCCCAGACTTACTTTATCCTCCTAAAGGAGATGCCTTTGCTGCTCGAAATGCCT
TTGCTTTAGATATTGATTATCAGGAAGAACCGCCAATGTTTAAAGTATCAGATACGCATTTTGCAGCAACATGGCTCTTA
GATGAACGAGCTCCTAAAGTAACCCCTCCTTCACCAATATTGAAACGATGGGAAAAATGGTCAAAGATGAAGGAGAAATA
A

Domains

Predicted by InterproScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (235-297)

• ABC transporter (ABC_tran) (27-183)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
oppD	Streptococcus mutans UA159	81.105	99.422	0.806
amiE	Streptococcus salivarius strain HSISS4	57.227	97.977	0.561
amiE	Streptococcus thermophilus LMG 18311	56.637	97.977	0.555
amiE	Streptococcus thermophilus LMD-9	56.637	97.977	0.555