Detailed information    

insolico Bioinformatically predicted

Overview


Name   pptA   Type   Regulator
Locus tag   ACM3H0_RS05500 Genome accession   NZ_CP180685
Coordinates   1025337..1026062 (-) Length   241 a.a.
NCBI ID   WP_000912314.1    Uniprot ID   A0AAW6XYE4
Organism   Streptococcus agalactiae strain M14     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 1020337..1031062
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACM3H0_RS05465 (ACM3H0_05465) rnpM 1020348..1020644 (-) 297 WP_001140526.1 RNase P modulator RnpM -
  ACM3H0_RS05470 (ACM3H0_05470) nusA 1020666..1021817 (-) 1152 WP_000032295.1 transcription termination factor NusA -
  ACM3H0_RS05475 (ACM3H0_05475) rimP 1021853..1022329 (-) 477 WP_041971671.1 ribosome maturation factor RimP -
  ACM3H0_RS05485 (ACM3H0_05485) trmB 1022818..1023453 (-) 636 WP_001266024.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  ACM3H0_RS05490 (ACM3H0_05490) ccrZ 1023443..1024243 (-) 801 WP_000155919.1 cell cycle regulator CcrZ -
  ACM3H0_RS05495 (ACM3H0_05495) - 1024301..1025335 (-) 1035 WP_000732715.1 ABC transporter permease -
  ACM3H0_RS05500 (ACM3H0_05500) pptA 1025337..1026062 (-) 726 WP_000912314.1 ABC transporter ATP-binding protein Regulator
  ACM3H0_RS05505 (ACM3H0_05505) - 1026134..1026320 (+) 187 Protein_1029 hypothetical protein -
  ACM3H0_RS05510 (ACM3H0_05510) - 1026372..1026875 (-) 504 WP_000773458.1 hypothetical protein -
  ACM3H0_RS05515 (ACM3H0_05515) - 1027211..1027630 (+) 420 WP_000368099.1 HIT family protein -
  ACM3H0_RS05520 (ACM3H0_05520) - 1027627..1027923 (+) 297 WP_000690175.1 hypothetical protein -
  ACM3H0_RS05525 (ACM3H0_05525) brpA 1027987..1029294 (-) 1308 WP_000708161.1 biofilm formation/cell division transcriptional regulator BrpA -
  ACM3H0_RS05530 (ACM3H0_05530) - 1029303..1029824 (-) 522 WP_000043149.1 GNAT family N-acetyltransferase -
  ACM3H0_RS05535 (ACM3H0_05535) tsaE 1029817..1030260 (-) 444 WP_000500161.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -

Sequence


Protein


Download         Length: 241 a.a.        Molecular weight: 26834.27 Da        Isoelectric Point: 4.6310

>NTDB_id=1097411 ACM3H0_RS05500 WP_000912314.1 1025337..1026062(-) (pptA) [Streptococcus agalactiae strain M14]
MLKIENVTGGYVNIPVLKNISFEVNDGELVGLIGLNGAGKSTTINEIIGILRPYQGDITIDGISLEANQELYRKKIGFIP
ETPSLYEELTLREHLETVAMAYDIATDEVMARAQKLLEMFRLTDKLDWFPMHFSKGMKQKVMIICAFVVSPSLFIVDEPF
LGLDPLAISDLINLLAEEKAKGKSILMSTHVLDSAEKMCDRFVILHKGEIRAVGTLEELRAIFGDSNANLNDIYIALTKE
V

Nucleotide


Download         Length: 726 bp        

>NTDB_id=1097411 ACM3H0_RS05500 WP_000912314.1 1025337..1026062(-) (pptA) [Streptococcus agalactiae strain M14]
ATGTTAAAAATTGAAAATGTTACAGGGGGGTATGTTAATATCCCAGTTTTAAAAAATATTTCTTTTGAAGTAAATGATGG
AGAGTTAGTTGGATTAATTGGGCTTAATGGTGCAGGAAAATCAACCACTATTAACGAGATTATTGGTATTTTGAGACCCT
ATCAAGGAGATATTACCATTGATGGCATTAGTCTTGAAGCCAACCAAGAACTTTATAGAAAGAAAATAGGCTTTATTCCT
GAGACACCAAGTCTCTATGAGGAACTAACTCTCAGGGAACATTTAGAAACGGTAGCTATGGCGTATGATATTGCCACCGA
TGAAGTTATGGCACGTGCGCAAAAACTATTAGAGATGTTTCGTCTAACAGATAAATTAGACTGGTTTCCAATGCATTTTT
CAAAGGGAATGAAACAAAAGGTTATGATTATTTGTGCTTTTGTTGTATCTCCAAGTTTATTTATTGTTGATGAACCATTT
TTAGGTTTGGATCCACTAGCTATTTCAGATTTGATTAATCTTCTAGCAGAAGAAAAAGCTAAAGGGAAATCTATTTTGAT
GTCAACACACGTATTAGATTCTGCCGAAAAAATGTGTGATCGTTTTGTTATTTTACATAAAGGAGAAATACGGGCAGTTG
GAACCCTAGAGGAATTACGGGCTATTTTTGGAGACAGTAATGCTAATTTAAATGACATCTACATAGCTCTGACAAAAGAG
GTGTGA

Domains


Predicted by InterproScan.

(17-160)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus thermophilus LMD-9

77.406

99.17

0.768

  pptA Streptococcus salivarius strain HSISS4

76.987

99.17

0.763


Multiple sequence alignment