Detailed information    

insolico Bioinformatically predicted

Overview


Name   comS   Type   Regulator
Locus tag   ACK2OW_RS21420 Genome accession   NZ_CP180575
Coordinates   4101739..4101879 (-) Length   46 a.a.
NCBI ID   WP_010886404.1    Uniprot ID   A0AAX3RTW8
Organism   Bacillus subtilis strain K3C     
Function   preventing the degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context


Location: 4096739..4106879
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACK2OW_RS21410 (ACK2OW_21410) - 4097327..4100548 (-) 3222 WP_416042714.1 amino acid adenylation domain-containing protein -
  ACK2OW_RS21415 (ACK2OW_21415) - 4100621..4101793 (-) 1173 Protein_4232 condensation domain-containing protein -
  ACK2OW_RS21420 (ACK2OW_21420) comS 4101739..4101879 (-) 141 WP_010886404.1 competence protein ComS Regulator
  ACK2OW_RS21425 (ACK2OW_21425) srfAB 4101923..4105015 (-) 3093 Protein_4234 surfactin non-ribosomal peptide synthetase SrfAB -
  ACK2OW_RS21430 (ACK2OW_21430) - 4105028..4106539 (-) 1512 Protein_4235 condensation domain-containing protein -

Sequence


Protein


Download         Length: 46 a.a.        Molecular weight: 5244.05 Da        Isoelectric Point: 9.2422

>NTDB_id=1096818 ACK2OW_RS21420 WP_010886404.1 4101739..4101879(-) (comS) [Bacillus subtilis strain K3C]
MNRSGKHLISSIILYPRPSGECISSISLDKQTQATTSPLYFCWREK

Nucleotide


Download         Length: 141 bp        

>NTDB_id=1096818 ACK2OW_RS21420 WP_010886404.1 4101739..4101879(-) (comS) [Bacillus subtilis strain K3C]
TTGAACCGATCAGGCAAGCATCTTATCAGCAGCATTATCCTGTATCCCCGGCCCAGCGGAGAATGTATATCCTCAATCAG
CTTGGACAAGCAAACACAAGCTACAACGTCCCCGCTGTACTTCTGCTGGAGGGAGAAGTAG

Domains


Predicted by InterproScan.

(1-44)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Bacillus subtilis subsp. subtilis str. 168

100

100

1


Multiple sequence alignment