Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   ACK2OW_RS16620 Genome accession   NZ_CP180575
Coordinates   3167219..3168013 (-) Length   264 a.a.
NCBI ID   WP_029726844.1    Uniprot ID   -
Organism   Bacillus subtilis strain K3C     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 3162219..3173013
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACK2OW_RS16585 (ACK2OW_16585) ephM 3163062..3163922 (-) 861 WP_014479220.1 epoxide hydrolase EphM -
  ACK2OW_RS16590 (ACK2OW_16590) spdL 3163924..3164241 (-) 318 WP_021481164.1 SdpC immunity protein SpdL -
  ACK2OW_RS16595 (ACK2OW_16595) yfhK 3164326..3164844 (-) 519 WP_416042351.1 SH3 domain-containing protein -
  ACK2OW_RS16600 (ACK2OW_16600) yfhJ 3164989..3165258 (-) 270 WP_003243789.1 YfhJ family protein -
  ACK2OW_RS16605 (ACK2OW_16605) sspK 3165383..3165535 (+) 153 WP_003223241.1 small, acid-soluble spore protein K -
  ACK2OW_RS16610 (ACK2OW_16610) yfhI 3165567..3166760 (-) 1194 WP_003243500.1 MFS transporter -
  ACK2OW_RS16615 (ACK2OW_16615) yfhH 3166903..3167217 (-) 315 WP_003244592.1 YfhH family protein -
  ACK2OW_RS16620 (ACK2OW_16620) recX 3167219..3168013 (-) 795 WP_029726844.1 recombination regulator RecX Regulator
  ACK2OW_RS16625 (ACK2OW_16625) yfhF 3168102..3169013 (+) 912 WP_128740137.1 TIGR01777 family oxidoreductase -
  ACK2OW_RS16630 (ACK2OW_16630) yfhE 3169068..3169178 (+) 111 WP_003223230.1 YfhE family protein -
  ACK2OW_RS16635 (ACK2OW_16635) yfhD 3169244..3169435 (+) 192 WP_003233561.1 YfhD family protein -
  ACK2OW_RS16640 (ACK2OW_16640) yfhC 3169474..3170058 (-) 585 WP_416042352.1 nitroreductase -
  ACK2OW_RS16645 (ACK2OW_16645) yfhB 3170146..3171027 (-) 882 WP_416042353.1 PhzF family phenazine biosynthesis isomerase -
  ACK2OW_RS16650 (ACK2OW_16650) sxzA 3171142..3172173 (-) 1032 WP_003233568.1 FecCD family ABC transporter permease -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 31047.25 Da        Isoelectric Point: 6.6686

>NTDB_id=1096806 ACK2OW_RS16620 WP_029726844.1 3167219..3168013(-) (recX) [Bacillus subtilis strain K3C]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKEFKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=1096806 ACK2OW_RS16620 WP_029726844.1 3167219..3168013(-) (recX) [Bacillus subtilis strain K3C]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGTGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGACCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAAGATCAGACAAGAGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACGAAAGAATTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACGG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATGAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

99.621

100

0.996

Multiple sequence alignment