Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   ACK2OW_RS14750 Genome accession   NZ_CP180575
Coordinates   2738206..2738670 (-) Length   154 a.a.
NCBI ID   WP_086343783.1    Uniprot ID   -
Organism   Bacillus subtilis strain K3C     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 2733206..2743670
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACK2OW_RS14730 (ACK2OW_14730) kinA 2733673..2735493 (+) 1821 WP_015252197.1 sporulation histidine kinase KinA -
  ACK2OW_RS14735 (ACK2OW_14735) dapX 2735503..2736684 (-) 1182 WP_021479391.1 aminotransferase A -
  ACK2OW_RS14740 (ACK2OW_14740) - 2736886..2737047 (-) 162 WP_014476654.1 hypothetical protein -
  ACK2OW_RS14745 (ACK2OW_14745) cheV 2737251..2738162 (+) 912 WP_014476655.1 chemotaxis protein CheV -
  ACK2OW_RS14750 (ACK2OW_14750) kre 2738206..2738670 (-) 465 WP_086343783.1 YkyB family protein Regulator
  ACK2OW_RS14755 (ACK2OW_14755) ykuC 2738796..2740088 (-) 1293 WP_014479656.1 MFS transporter -
  ACK2OW_RS14760 (ACK2OW_14760) ltdD 2740164..2740658 (-) 495 WP_416042703.1 L,D-transpeptidase family protein -
  ACK2OW_RS14765 (ACK2OW_14765) ppeE 2740715..2741575 (-) 861 WP_416042319.1 metallophosphoesterase -
  ACK2OW_RS14770 (ACK2OW_14770) fadH 2741718..2742482 (+) 765 WP_015383534.1 2,4-dienoyl-CoA reductase -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17865.68 Da        Isoelectric Point: 10.3545

>NTDB_id=1096799 ACK2OW_RS14750 WP_086343783.1 2738206..2738670(-) (kre) [Bacillus subtilis strain K3C]
MDDHAYAKDLQPTVENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSKNPRFSQQQSDVLISIGD
YYFHMPPTKEDFEHLPHLGTLNQSYRNPKAQMSLTKAKHLLQEYVGMKEKPLVPNRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=1096799 ACK2OW_RS14750 WP_086343783.1 2738206..2738670(-) (kre) [Bacillus subtilis strain K3C]
ATGGACGACCATGCATATGCGAAAGATCTGCAGCCAACCGTAGAAAATCTTTCAAAAGCAGTTTACACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTATATCTGCTGAAAAAACGGGCTTTGCAAAAGCTTGTCAAAGAAGGTAAAG
GAAAGAAAATAGGGCTTCATTTTTCAAAAAATCCAAGGTTCAGCCAACAGCAATCGGACGTGCTTATCTCAATCGGAGAC
TACTATTTTCACATGCCTCCAACTAAAGAAGACTTCGAACATCTTCCGCATTTAGGTACACTTAATCAATCGTACCGAAA
TCCTAAAGCTCAAATGTCTTTAACAAAAGCGAAACACCTATTGCAAGAATATGTCGGCATGAAAGAAAAGCCGCTAGTGC
CAAATCGCCAGCAGCCAGCTTACCATAAACCGGTCTTTAAAAAACTTGGCGAGAGTTACTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

99.351

100

0.994

Multiple sequence alignment