Detailed information    

insolico Bioinformatically predicted

Overview

Name   treR   Type   Regulator
Locus tag   ACGHT2_RS10535 Genome accession   NZ_AP031455
Coordinates   2016527..2017240 (+) Length   237 a.a.
NCBI ID   WP_003066857.1    Uniprot ID   -
Organism   Streptococcus pasteurianus strain k46-0107-A9     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2011527..2022240
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACGHT2_RS10520 (K460107A9_19810) - 2012381..2012713 (+) 333 WP_043910338.1 hypothetical protein -
  ACGHT2_RS10525 (K460107A9_19820) treC 2012663..2014342 (-) 1680 WP_013852321.1 alpha,alpha-phosphotrehalase -
  ACGHT2_RS10530 (K460107A9_19830) treP 2014357..2016330 (-) 1974 WP_270619807.1 PTS system trehalose-specific EIIBC component -
  ACGHT2_RS10535 (K460107A9_19840) treR 2016527..2017240 (+) 714 WP_003066857.1 trehalose operon repressor Regulator
  ACGHT2_RS10540 (K460107A9_19850) - 2017650..2018000 (-) 351 Protein_2018 isopeptide-forming domain-containing fimbrial protein -
  ACGHT2_RS10545 (K460107A9_19860) ruvB 2018784..2019782 (-) 999 WP_003066863.1 Holliday junction branch migration DNA helicase RuvB -
  ACGHT2_RS10550 (K460107A9_19870) nrdG 2019911..2020525 (-) 615 WP_003066866.1 anaerobic ribonucleoside-triphosphate reductase activating protein -
  ACGHT2_RS10555 (K460107A9_19880) - 2020566..2021072 (-) 507 WP_003066869.1 GNAT family N-acetyltransferase -
  ACGHT2_RS10560 (K460107A9_19890) - 2021084..2021230 (-) 147 WP_013852326.1 hypothetical protein -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27388.39 Da        Isoelectric Point: 7.3320

>NTDB_id=109637 ACGHT2_RS10535 WP_003066857.1 2016527..2017240(+) (treR) [Streptococcus pasteurianus strain k46-0107-A9]
MKKYEQIFKDLEHDITSGIYQAGDYLPTENELTQTYHMSRDTIRKALSLLAEAGLIQKIHGSGSQVIKHEQIDFPVSQLT
SYKELVDAHHINSKTNVIAIDKLIVDEKLAALTGFKKNNLVWRIIRQRVVDGTASVLDIDYLDKKIVPNMTREIAEQSIY
DYLENQLHLIIAFAQKEITIDQLTDRDKLLLDIGAEHHVVSVKSKVYLANKHQFQFTESRHKLEKFRFVDFATRKPQ

Nucleotide


Download         Length: 714 bp        

>NTDB_id=109637 ACGHT2_RS10535 WP_003066857.1 2016527..2017240(+) (treR) [Streptococcus pasteurianus strain k46-0107-A9]
ATGAAAAAATACGAACAAATCTTTAAAGACCTTGAACACGATATTACCTCTGGCATTTACCAAGCTGGTGACTATCTCCC
CACCGAAAACGAGCTAACCCAAACCTACCATATGAGCCGTGACACTATCCGCAAAGCGCTTAGTCTCCTTGCTGAAGCAG
GGCTTATCCAGAAAATTCACGGTTCTGGCTCTCAAGTCATTAAGCACGAGCAGATTGATTTTCCCGTTTCACAGCTCACA
AGCTATAAAGAGCTGGTCGACGCTCACCATATCAATTCCAAAACCAATGTCATTGCCATTGATAAACTTATCGTTGATGA
AAAATTAGCTGCGCTGACAGGTTTCAAGAAAAATAACCTTGTCTGGCGAATCATTCGCCAACGTGTCGTTGACGGCACCG
CTTCTGTCCTTGACATTGATTATTTAGACAAAAAAATCGTGCCAAATATGACACGAGAAATCGCCGAACAATCCATTTAC
GATTACCTTGAAAACCAACTCCACCTCATCATCGCTTTCGCTCAAAAAGAAATCACCATTGACCAGCTAACTGACCGTGA
CAAACTACTCCTTGACATCGGTGCCGAACACCACGTTGTCTCTGTCAAATCAAAAGTTTACCTCGCCAACAAACACCAAT
TCCAATTCACCGAAAGCAGACACAAACTCGAAAAATTCCGCTTCGTTGACTTCGCAACCCGAAAACCACAGTAA

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, gntR family (GntR)

(3-66)

UTRA domain (UTRA)

(91-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  treR Streptococcus mutans UA159

71.795

98.734

0.709

Multiple sequence alignment