Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   ACLHR4_RS17605 Genome accession   NZ_CP180538
Coordinates   3477508..3478104 (-) Length   198 a.a.
NCBI ID   WP_004150836.1    Uniprot ID   A0A0H3GL50
Organism   Klebsiella pneumoniae strain KP5918     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 3472508..3483104
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACLHR4_RS17590 helD 3472716..3474770 (-) 2055 WP_002898429.1 DNA helicase IV -
  ACLHR4_RS17595 - 3474895..3475341 (+) 447 WP_002898425.1 YccF domain-containing protein -
  ACLHR4_RS17600 yccS 3475359..3477494 (+) 2136 WP_002898422.1 YccS family putative transporter -
  ACLHR4_RS17605 sxy/tfoX 3477508..3478104 (-) 597 WP_004150836.1 TfoX/Sxy family DNA transformation protein Regulator
  ACLHR4_RS17610 sulA 3478453..3478962 (+) 510 WP_002898418.1 SOS-induced cell division inhibitor SulA -
  ACLHR4_RS17615 ompA 3479315..3480385 (+) 1071 WP_062954987.1 porin OmpA -
  ACLHR4_RS17620 matP 3480517..3480969 (-) 453 WP_002898404.1 macrodomain Ter protein MatP -
  ACLHR4_RS17625 - 3481155..3482912 (+) 1758 WP_002898401.1 AAA family ATPase -

Sequence

Protein


Download         Length: 198 a.a.        Molecular weight: 22576.15 Da        Isoelectric Point: 10.1298

>NTDB_id=1096312 ACLHR4_RS17605 WP_004150836.1 3477508..3478104(-) (sxy/tfoX) [Klebsiella pneumoniae strain KP5918]
MRKLVCPRLPQFQACVSPLGQLHTRPLFGGYSLAIDDTVFAMVAEGNIYLKACEQSAAYRVEHRNPLLTLRRHGRIVPLK
YYQIDDTLWRDEQQLFRLSLLSWQSAQREKNYRRASGRLKDLPNISFHMELQLIHAGIPDVRTLREVGAQEAWLRLRVNN
ASLSLSVLLALEGAIAGVHAAALPTPRRQELLEWAATR

Nucleotide


Download         Length: 597 bp        

>NTDB_id=1096312 ACLHR4_RS17605 WP_004150836.1 3477508..3478104(-) (sxy/tfoX) [Klebsiella pneumoniae strain KP5918]
ATGAGAAAACTAGTTTGTCCGCGGCTCCCGCAATTTCAGGCCTGCGTCTCACCGCTGGGTCAACTGCATACTCGTCCGCT
CTTTGGCGGCTACAGCCTGGCTATTGATGATACGGTGTTTGCGATGGTGGCCGAGGGGAACATTTATCTGAAGGCCTGCG
AGCAGAGCGCTGCTTATCGGGTGGAACATCGTAATCCTCTGTTAACGCTGCGCCGACACGGCCGCATAGTGCCGCTGAAG
TATTATCAAATTGACGACACTTTATGGCGCGATGAGCAGCAGCTTTTTCGGCTATCGCTACTGTCGTGGCAGAGTGCGCA
GCGCGAAAAGAACTACCGACGGGCGTCGGGCCGCCTGAAGGATTTACCCAATATCAGCTTTCATATGGAATTGCAGCTGA
TTCACGCGGGCATACCGGACGTTAGGACGTTGCGGGAAGTTGGTGCGCAGGAGGCATGGCTGAGGCTACGCGTAAATAAT
GCTTCTTTATCGCTGAGCGTATTGCTGGCGCTGGAGGGGGCGATTGCCGGGGTACATGCCGCCGCGCTCCCGACGCCACG
GCGTCAGGAGCTTCTCGAATGGGCGGCTACCCGGTAG

Domains

Predicted by InterproScan.

TfoX C-terminal domain (TfoX_C)

(117-194)

TfoX N-terminal domain (TfoX_N)

(16-105)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H3GL50

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

51.269

99.495

0.51

Multiple sequence alignment