Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrR   Type   Regulator
Locus tag   ACGHT2_RS06600 Genome accession   NZ_AP031455
Coordinates   1239678..1240118 (-) Length   146 a.a.
NCBI ID   WP_003065254.1    Uniprot ID   E0PEB8
Organism   Streptococcus pasteurianus strain k46-0107-A9     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1234678..1245118
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACGHT2_RS06585 (K460107A9_12140) - 1234854..1235831 (-) 978 WP_013851964.1 alcohol dehydrogenase catalytic domain-containing protein -
  ACGHT2_RS06590 (K460107A9_12150) rcrQ 1236098..1237870 (-) 1773 WP_013851965.1 ABC transporter ATP-binding protein Regulator
  ACGHT2_RS06595 (K460107A9_12160) rcrP 1237860..1239674 (-) 1815 WP_069788928.1 ABC transporter ATP-binding protein Regulator
  ACGHT2_RS06600 (K460107A9_12170) rcrR 1239678..1240118 (-) 441 WP_003065254.1 MarR family winged helix-turn-helix transcriptional regulator Regulator
  ACGHT2_RS06605 (K460107A9_12180) - 1240292..1240702 (-) 411 WP_003065257.1 peptide deformylase -
  ACGHT2_RS06610 (K460107A9_12190) - 1240699..1241208 (-) 510 WP_003065260.1 GNAT family N-acetyltransferase -
  ACGHT2_RS06615 (K460107A9_12200) gdhA 1241475..1242824 (-) 1350 WP_003065263.1 NADP-specific glutamate dehydrogenase -
  ACGHT2_RS06620 (K460107A9_12210) - 1243070..1243567 (+) 498 WP_003065265.1 DUF308 domain-containing protein -
  ACGHT2_RS06625 (K460107A9_12220) queF 1243623..1244114 (-) 492 WP_003065267.1 preQ(1) synthase -
  ACGHT2_RS06630 (K460107A9_12230) queE 1244127..1244840 (-) 714 WP_003065269.1 7-carboxy-7-deazaguanine synthase QueE -

Sequence

Protein


Download         Length: 146 a.a.        Molecular weight: 17097.56 Da        Isoelectric Point: 8.4684

>NTDB_id=109620 ACGHT2_RS06600 WP_003065254.1 1239678..1240118(-) (rcrR) [Streptococcus pasteurianus strain k46-0107-A9]
MHKKDPFSQFRDFINLAENRVHALAESHGVENLAGPQGFAVLYLHDNPDKEIYIKDIEKRLRISKSVTSNLIKRMEKNGF
IQIISSIEDKRYKQVVLTELGKSKAQNIQDFYDEMHRQILAGVDHEDLKISFRVFDRILKNLENKE

Nucleotide


Download         Length: 441 bp        

>NTDB_id=109620 ACGHT2_RS06600 WP_003065254.1 1239678..1240118(-) (rcrR) [Streptococcus pasteurianus strain k46-0107-A9]
ATGCATAAGAAAGATCCGTTTTCACAGTTTAGGGATTTTATCAATTTAGCGGAAAATCGTGTCCATGCTCTTGCGGAAAG
TCATGGTGTTGAAAATCTGGCTGGTCCACAGGGATTTGCAGTGTTGTATCTCCATGATAATCCTGATAAAGAAATTTATA
TCAAGGATATTGAGAAGAGACTAAGAATTTCAAAGTCAGTGACTAGTAATTTGATTAAGCGCATGGAGAAAAATGGTTTT
ATCCAAATTATTTCGTCAATAGAAGATAAGCGTTATAAGCAAGTGGTGTTGACTGAACTTGGAAAATCAAAGGCTCAAAA
CATTCAAGATTTCTATGATGAAATGCATAGACAAATCTTAGCTGGTGTTGACCATGAGGATCTCAAAATTTCGTTTCGCG
TCTTTGACCGCATTTTGAAAAATTTAGAAAACAAGGAGTAA

Domains

Predicted by InterproScan.

MarR family (MarR_2)

(35-91)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB E0PEB8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrR Streptococcus mutans UA159

55.944

97.945

0.548

Multiple sequence alignment