Detailed information    

insolico Bioinformatically predicted

Overview

Name   tonB2   Type   Machinery gene
Locus tag   ACMZ68_RS15680 Genome accession   NZ_CP180522
Coordinates   3302494..3303378 (-) Length   294 a.a.
NCBI ID   WP_415871406.1    Uniprot ID   -
Organism   Acinetobacter pittii strain AP5091     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 3297494..3308378
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACMZ68_RS15665 (ACMZ68_15665) miaB 3299379..3300830 (+) 1452 WP_002119558.1 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB -
  ACMZ68_RS15670 (ACMZ68_15670) phoL 3300868..3301956 (+) 1089 WP_002119513.1 PhoH family protein -
  ACMZ68_RS15675 (ACMZ68_15675) ybeY 3301966..3302442 (+) 477 WP_017481656.1 rRNA maturation RNase YbeY -
  ACMZ68_RS15680 (ACMZ68_15680) tonB2 3302494..3303378 (-) 885 WP_415871406.1 energy transducer TonB Machinery gene
  ACMZ68_RS15685 (ACMZ68_15685) - 3303611..3304282 (+) 672 WP_068615277.1 hypothetical protein -
  ACMZ68_RS15690 (ACMZ68_15690) - 3304441..3305154 (+) 714 WP_014207724.1 DUF3108 domain-containing protein -
  ACMZ68_RS15695 (ACMZ68_15695) xpt 3305227..3305802 (+) 576 WP_002119547.1 xanthine phosphoribosyltransferase -
  ACMZ68_RS15700 (ACMZ68_15700) wrbA 3305856..3306458 (-) 603 WP_415871407.1 NAD(P)H:quinone oxidoreductase -
  ACMZ68_RS15705 (ACMZ68_15705) - 3306820..3308067 (+) 1248 WP_002119535.1 YihY family inner membrane protein -

Sequence

Protein


Download         Length: 294 a.a.        Molecular weight: 33630.19 Da        Isoelectric Point: 7.6435

>NTDB_id=1096194 ACMZ68_RS15680 WP_415871406.1 3302494..3303378(-) (tonB2) [Acinetobacter pittii strain AP5091]
MLNKRSLSIEPFHHWWQDRVFIAATILAILLHIFVLLIHFAMPSPSEQSTKEIAISIRPSNEPVHQADFLAQADQQGSGA
FREAHRTSSDTPNPMLNDASTGNTELESLQKIQQQRELKFEEKVLMTVLSWQKQADASQRKKELEQLQSQFQAKAAMVAS
LEAQYLQRQQDFSRQQKIKTVDGIQAKKDASAIYLDKFREKVELYGNRYYPEEAKQQQLKGEVRLMVILNAQGGIRAIRL
LESSGHSILDEAAKSSVRRGAPFGHFDANMKDISELRIVRTWRFDPAEAEFEVH

Nucleotide


Download         Length: 885 bp        

>NTDB_id=1096194 ACMZ68_RS15680 WP_415871406.1 3302494..3303378(-) (tonB2) [Acinetobacter pittii strain AP5091]
ATGTTGAACAAAAGAAGTTTATCCATAGAGCCTTTTCATCATTGGTGGCAAGACCGAGTCTTTATTGCTGCAACAATATT
GGCAATCTTACTGCATATTTTTGTATTGCTCATTCACTTTGCCATGCCTAGCCCCTCAGAGCAATCTACTAAAGAAATTG
CAATTTCAATTCGGCCAAGCAATGAGCCAGTTCACCAAGCAGATTTTTTAGCGCAAGCAGATCAGCAAGGCTCGGGCGCA
TTTCGTGAAGCTCATCGGACTTCTAGTGATACTCCAAATCCGATGCTCAATGATGCTTCAACTGGAAATACTGAGTTAGA
AAGTTTGCAAAAGATACAGCAACAAAGAGAGCTTAAATTTGAAGAAAAAGTTTTAATGACGGTTTTGAGTTGGCAGAAAC
AAGCGGATGCAAGCCAAAGAAAAAAAGAACTAGAACAACTACAAAGTCAATTTCAAGCAAAAGCTGCCATGGTTGCAAGC
CTTGAAGCACAATATTTGCAACGCCAACAAGATTTCAGCCGTCAGCAAAAAATAAAGACAGTAGACGGTATTCAAGCAAA
GAAAGATGCTTCAGCTATTTATTTAGATAAATTTCGTGAAAAAGTAGAGCTTTATGGCAACCGTTATTATCCAGAAGAAG
CGAAACAGCAGCAGTTAAAAGGTGAAGTTCGCCTTATGGTAATTTTGAATGCTCAAGGGGGAATCCGTGCAATCCGTCTG
CTTGAAAGTTCAGGGCATTCAATACTAGACGAAGCAGCGAAGTCTTCAGTACGCCGCGGCGCACCATTTGGGCATTTTGA
TGCCAATATGAAAGATATTTCGGAGTTGCGTATTGTACGTACTTGGCGTTTTGACCCAGCTGAAGCTGAATTTGAGGTTC
ATTAA

Domains

Predicted by InterproScan.

Gram-negative bacterial TonB protein C-terminal (TonB_C)

(207-284)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  tonB2 Acinetobacter baumannii D1279779

88.776

100

0.888

Multiple sequence alignment