Detailed information    

insolico Bioinformatically predicted

Overview

Name   priA   Type   Machinery gene
Locus tag   ACMZ68_RS01780 Genome accession   NZ_CP180522
Coordinates   376941..379169 (-) Length   742 a.a.
NCBI ID   WP_415871646.1    Uniprot ID   -
Organism   Acinetobacter pittii strain AP5091     
Function   DNA puliing through the inner membrane (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 371941..384169
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACMZ68_RS01760 (ACMZ68_01760) cbpA 372128..373084 (-) 957 WP_415871643.1 DnaJ C-terminal domain-containing protein -
  ACMZ68_RS01765 (ACMZ68_01765) - 373231..373842 (-) 612 WP_415871644.1 LysE family translocator -
  ACMZ68_RS01770 (ACMZ68_01770) hslO 373980..374855 (-) 876 WP_005079292.1 Hsp33 family molecular chaperone HslO -
  ACMZ68_RS01775 (ACMZ68_01775) kefB 375020..376864 (-) 1845 WP_415871645.1 monovalent cation:proton antiporter-2 (CPA2) family protein -
  ACMZ68_RS01780 (ACMZ68_01780) priA 376941..379169 (-) 2229 WP_415871646.1 primosomal protein N' Machinery gene
  ACMZ68_RS01785 (ACMZ68_01785) gspF 379318..380523 (+) 1206 WP_005065941.1 type II secretion system inner membrane protein GspF -
  ACMZ68_RS01790 (ACMZ68_01790) gspG 380547..381062 (+) 516 WP_017402575.1 type II secretion system major pseudopilin GspG -
  ACMZ68_RS01795 (ACMZ68_01795) - 381330..381674 (+) 345 WP_033849575.1 hypothetical protein -
  ACMZ68_RS01800 (ACMZ68_01800) csaA 381820..382158 (+) 339 WP_005079284.1 tRNA-binding protein -
  ACMZ68_RS01805 (ACMZ68_01805) lnt 382160..383719 (-) 1560 WP_415871647.1 apolipoprotein N-acyltransferase -

Sequence

Protein


Download         Length: 742 a.a.        Molecular weight: 84060.76 Da        Isoelectric Point: 8.3558

>NTDB_id=1096175 ACMZ68_RS01780 WP_415871646.1 376941..379169(-) (priA) [Acinetobacter pittii strain AP5091]
MTITPKPDSVVYRVRVAVPVHLYDTFDYTLTQAQYERAHVGSRVAISFGRQNLIGIITEKVDPSESFTGTFQLKAISDLL
DEEPILDEQVLSLLTWSAQYYQFPIGEVMQTALPALLRQGKPMDVLFHLWKITPCDNVEALLKRSVKQQDAYQILKLHSA
GTTENILNLSGVETATLKALQKKGLVDCTLEPHDFSPSPVELAQMPLTLNEDQKKATQHVVNAQHQYQAFLLDGLTGSGK
TEVYLHIMHEVLKQGKQVLVLVPEIGLTPQTISRFKSRFNCDIALLHSGLNDSKRLQAWQQAQTGKASIILGTRSAIYTP
LPRLGLIILDEEHDLSYKQQEGFRYHARDVALYRGHLQNCPVILGSATPSIDSYYLVETGKLTSLQLNQRAGHALLPKMH
LIDLKIVKKQHGISQPLIEQIKNTLARKEQVLIFLNRRGYAPVLVCESCGWQANCPHCDAHFTLHTQPYSYLHCHHCGTV
HRLPDHCPECQQKSLKTLGAGTAKVEEHLQELFPDYDVIRVDRDSTSRVGSWQKIYDRIHQNKPTILLGTQMLAKGHHFP
HVTLVAILDIDAGLLSVDIRAPERTAQLIVQVAGRAGRGEHKGHVYLQTLRPDHPLLTTLIEKDYRAVAKQTLAERKVAL
LPPYRYAVLIRAESKDRDYTLHFLNEAAEQLRQIAGEIVDIWGPIPAPMERKAGRYRAHMVILSTERARLHFYLRQWWSQ
LVHAPRQHQLRLSIDVDPQEFN

Nucleotide


Download         Length: 2229 bp        

>NTDB_id=1096175 ACMZ68_RS01780 WP_415871646.1 376941..379169(-) (priA) [Acinetobacter pittii strain AP5091]
ATGACCATAACGCCAAAGCCTGATTCAGTTGTTTATCGTGTGCGTGTAGCCGTACCTGTACATCTGTACGACACTTTTGA
CTATACACTCACCCAAGCACAATATGAACGGGCTCATGTAGGCTCACGCGTCGCTATTTCATTTGGGCGCCAAAACCTGA
TTGGCATCATTACTGAAAAAGTTGATCCAAGTGAATCATTTACAGGCACCTTTCAGCTTAAAGCCATTTCTGACCTTTTA
GATGAAGAACCAATTTTAGATGAACAAGTTTTAAGTTTATTGACATGGTCCGCGCAATATTACCAATTTCCAATTGGTGA
GGTCATGCAAACTGCTCTACCCGCGTTATTGCGTCAGGGCAAACCGATGGATGTTTTGTTTCATCTTTGGAAAATCACAC
CATGTGATAATGTTGAAGCACTTCTTAAACGCTCTGTTAAGCAACAAGACGCGTATCAAATTTTAAAATTACACTCTGCC
GGAACTACAGAGAATATTCTTAATTTAAGTGGTGTAGAAACGGCTACGCTTAAAGCACTTCAAAAGAAAGGACTGGTTGA
CTGTACGCTTGAACCGCACGACTTTAGCCCATCGCCTGTTGAATTGGCACAAATGCCGCTCACGCTAAATGAAGACCAAA
AGAAAGCAACCCAGCACGTCGTAAACGCACAGCATCAATACCAAGCCTTTTTATTAGATGGTTTAACAGGAAGTGGTAAA
ACTGAAGTTTATCTGCACATCATGCACGAAGTGCTAAAGCAAGGTAAGCAAGTACTGGTGTTAGTCCCTGAAATTGGTCT
AACCCCTCAAACGATTTCTCGTTTTAAATCACGTTTTAACTGTGATATTGCTCTATTACACTCGGGCTTAAATGACTCCA
AACGCTTGCAGGCATGGCAACAGGCCCAGACTGGCAAAGCATCTATTATTTTAGGAACGCGCTCTGCCATCTATACGCCA
CTGCCACGTTTGGGCCTCATCATCTTAGATGAAGAACATGATCTGTCTTATAAGCAACAAGAAGGCTTCCGCTACCATGC
GCGTGATGTCGCTCTTTATCGAGGCCACTTACAAAACTGCCCTGTTATTTTAGGTTCAGCAACACCGAGCATAGATAGTT
ATTATTTGGTCGAAACTGGTAAATTAACTTCACTGCAACTTAATCAACGTGCAGGCCATGCGCTTTTACCTAAAATGCAT
TTGATTGACCTTAAAATTGTCAAAAAACAGCATGGAATTAGCCAGCCTTTAATCGAACAGATTAAAAATACCCTAGCTAG
AAAAGAACAGGTTTTAATCTTTTTAAACCGTCGTGGCTATGCACCTGTACTGGTCTGTGAAAGTTGTGGATGGCAAGCAA
ATTGTCCGCATTGTGATGCGCATTTTACGTTGCACACTCAGCCTTATTCTTATTTACACTGCCACCACTGCGGTACTGTT
CATCGCTTGCCAGACCATTGCCCTGAATGCCAGCAAAAAAGCTTAAAAACCTTAGGGGCAGGAACTGCCAAGGTTGAAGA
GCACTTACAAGAACTATTTCCAGACTATGATGTGATTCGGGTTGACCGTGACAGCACCAGTCGTGTCGGTAGCTGGCAAA
AAATCTATGATCGGATTCATCAAAACAAACCAACAATTTTGCTTGGCACTCAAATGCTGGCAAAAGGTCATCATTTCCCA
CACGTGACTTTGGTTGCCATTTTAGATATTGATGCTGGGTTACTTAGTGTCGACATTCGTGCGCCAGAACGTACTGCGCA
GTTAATTGTACAAGTCGCTGGTCGTGCAGGTCGTGGTGAACACAAAGGCCATGTTTATTTACAGACCTTAAGACCAGATC
ACCCTTTACTCACCACACTCATCGAAAAAGATTATCGGGCGGTTGCCAAACAAACTCTTGCGGAACGTAAAGTCGCATTG
CTGCCACCTTATCGTTATGCAGTACTGATACGTGCAGAATCTAAAGATCGTGACTATACCTTACATTTTTTAAATGAAGC
GGCGGAACAATTACGCCAAATTGCAGGTGAAATTGTTGATATTTGGGGACCGATTCCAGCCCCTATGGAGCGTAAAGCAG
GACGCTACCGCGCCCACATGGTAATTTTATCTACTGAACGTGCTCGTCTACATTTTTACTTAAGACAATGGTGGTCACAA
TTGGTTCATGCGCCGCGCCAGCATCAACTCAGATTATCAATTGATGTTGATCCGCAAGAATTTAATTAG

Domains

Predicted by InterproScan.

Type III restriction enzyme, res subunit (ResIII)

(208-370)

Primosomal protein N C-terminal domain (PriA_C)

(643-738)

3DNA-binding domain (3BD) (PriA_3primeBD)

(15-114)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  priA Acinetobacter baumannii D1279779

97.709

100

0.977

Multiple sequence alignment