Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   ACMXYJ_RS03275 Genome accession   NZ_CP180480
Coordinates   711225..711629 (+) Length   134 a.a.
NCBI ID   WP_008152601.1    Uniprot ID   -
Organism   Pseudomonas sp. LT1P18     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 706225..716629
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACMXYJ_RS03245 - 706249..707253 (-) 1005 WP_074871640.1 aspartate carbamoyltransferase catalytic subunit -
  ACMXYJ_RS03250 pyrR 707281..707784 (-) 504 WP_008152613.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  ACMXYJ_RS03255 ruvX 707869..708306 (-) 438 WP_005792259.1 Holliday junction resolvase RuvX -
  ACMXYJ_RS03260 - 708306..708878 (-) 573 WP_046045231.1 YqgE/AlgH family protein -
  ACMXYJ_RS03265 - 709060..709959 (-) 900 WP_415758759.1 TonB family protein -
  ACMXYJ_RS03270 gshB 710037..710990 (-) 954 WP_415758760.1 glutathione synthase -
  ACMXYJ_RS03275 pilG 711225..711629 (+) 405 WP_008152601.1 twitching motility response regulator PilG Regulator
  ACMXYJ_RS03280 pilH 711687..712052 (+) 366 WP_008068134.1 twitching motility response regulator PilH -
  ACMXYJ_RS03285 - 712063..712596 (+) 534 WP_415758761.1 chemotaxis protein CheW -
  ACMXYJ_RS03290 - 712736..714793 (+) 2058 WP_415758762.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 134 a.a.        Molecular weight: 14589.99 Da        Isoelectric Point: 7.2441

>NTDB_id=1096060 ACMXYJ_RS03275 WP_008152601.1 711225..711629(+) (pilG) [Pseudomonas sp. LT1P18]
MEQHSSALKVMVIDDSKTIRRTAETLLKNVGCEVITAIDGFDALAKIADNHPGIIFVDIMMPRLDGYQTCALIKNNSAFK
STPVIMLSSKDGLFDKAKGRIVGSDQFLTKPFSKEELLNAIQAHVPGFAAVLPQ

Nucleotide


Download         Length: 405 bp        

>NTDB_id=1096060 ACMXYJ_RS03275 WP_008152601.1 711225..711629(+) (pilG) [Pseudomonas sp. LT1P18]
ATGGAACAGCATTCCAGCGCCTTGAAGGTCATGGTGATCGACGATTCGAAAACGATTCGCCGTACCGCCGAAACGCTTTT
GAAAAACGTGGGGTGTGAAGTGATCACGGCCATCGATGGTTTCGATGCTCTGGCCAAGATTGCCGACAATCACCCCGGCA
TCATCTTTGTCGACATCATGATGCCGCGTCTGGATGGTTATCAGACCTGCGCTTTAATCAAGAACAACAGTGCGTTCAAG
TCCACGCCAGTGATTATGCTGTCGTCCAAGGACGGGCTGTTCGACAAGGCCAAGGGGCGCATCGTCGGCTCCGACCAGTT
TTTGACCAAGCCTTTCAGCAAGGAAGAACTGCTGAACGCGATCCAGGCCCATGTACCGGGCTTCGCCGCCGTTTTGCCGC
AGTAG

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

76

93.284

0.709

Multiple sequence alignment