Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   ACGHT2_RS02680 Genome accession   NZ_AP031455
Coordinates   480047..481132 (+) Length   361 a.a.
NCBI ID   WP_003063624.1    Uniprot ID   A0AAW6YLA3
Organism   Streptococcus pasteurianus strain k46-0107-A9     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 475047..486132
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACGHT2_RS02645 - 475186..475485 (+) 300 Protein_450 macrolide ABC transporter permease -
  ACGHT2_RS02650 - 475464..475667 (+) 204 WP_270619655.1 hypothetical protein -
  ACGHT2_RS02655 (K460107A9_04480) asnA 476045..477037 (+) 993 WP_058813699.1 aspartate--ammonia ligase -
  ACGHT2_RS02660 (K460107A9_04490) - 477171..477902 (-) 732 WP_111712657.1 hypothetical protein -
  ACGHT2_RS02665 (K460107A9_04500) - 478063..478866 (-) 804 WP_069789008.1 hypothetical protein -
  ACGHT2_RS02670 (K460107A9_04510) rsmD 479000..479539 (+) 540 WP_041972944.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  ACGHT2_RS02675 (K460107A9_04520) coaD 479572..480069 (+) 498 WP_013851552.1 pantetheine-phosphate adenylyltransferase -
  ACGHT2_RS02680 (K460107A9_04530) sepM 480047..481132 (+) 1086 WP_003063624.1 SepM family pheromone-processing serine protease Regulator
  ACGHT2_RS02685 (K460107A9_04540) - 481261..481515 (+) 255 WP_003063626.1 DUF3923 family protein -
  ACGHT2_RS02690 - 481607..481747 (+) 141 Protein_459 aquaporin -
  ACGHT2_RS02695 (K460107A9_04550) - 481818..483143 (+) 1326 WP_058692765.1 bifunctional UDP-sugar hydrolase/5'-nucleotidase -
  ACGHT2_RS02700 (K460107A9_04560) - 483175..483753 (+) 579 WP_003063631.1 YutD-like domain-containing protein -
  ACGHT2_RS02705 (K460107A9_04570) rlmN 483775..484881 (+) 1107 WP_058692766.1 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN -
  ACGHT2_RS02710 (K460107A9_04580) - 484881..485402 (+) 522 WP_058692767.1 VanZ family protein -

Sequence


Protein


Download         Length: 361 a.a.        Molecular weight: 39061.74 Da        Isoelectric Point: 4.0869

>NTDB_id=109606 ACGHT2_RS02680 WP_003063624.1 480047..481132(+) (sepM) [Streptococcus pasteurianus strain k46-0107-A9]
MAILKRFKEILKKLGRILYRFKWWILGVVGIVFLLFSLLYPLDYYIEMPGGAYDIRSVLTVDNKEDDEDGSYNFVAVTVS
QATLAQLVYAWLTPYTEISTAADVTGGYSNADYLRINEYYMETSQNTATYQALTLAGKEATLDYQGVYVLNVSDNSTFKG
ILNISDTVTGVNGQTFNSSAELMAYVADLDLGSEVTVQYTSDGEAKEATGKIIELSNGKNGIGIGLVDHTSVSSDVDVNF
DTSGVGGPSAGLMFTLDIYDQLNSEDLRKGRKIAGTGTIESDGSVGDIGGAALKVVAAAKAGADIFFVPNNPVDEETLKK
DPDAKTNYEEAVAAAKDLDTDMKIVPVTTVQEAIDYLRNND

Nucleotide


Download         Length: 1086 bp        

>NTDB_id=109606 ACGHT2_RS02680 WP_003063624.1 480047..481132(+) (sepM) [Streptococcus pasteurianus strain k46-0107-A9]
ATGGCAATCTTAAAAAGATTTAAAGAGATTTTGAAAAAGTTGGGTCGTATTTTATATCGCTTTAAGTGGTGGATATTAGG
TGTTGTAGGCATTGTTTTCTTACTATTTAGCTTGTTGTATCCGCTTGATTACTATATTGAAATGCCTGGTGGTGCTTATG
ATATTCGTAGCGTTTTAACGGTTGATAATAAGGAAGATGACGAAGATGGCTCTTATAATTTTGTGGCTGTCACGGTTAGT
CAGGCGACCTTGGCACAATTGGTTTATGCTTGGTTAACTCCCTACACAGAAATTTCGACAGCCGCAGATGTGACTGGTGG
TTATAGTAATGCTGATTATCTTCGTATCAATGAGTATTACATGGAAACCTCTCAGAATACAGCGACTTATCAAGCCTTAA
CATTGGCAGGAAAGGAAGCAACGCTTGATTATCAAGGGGTTTATGTTTTAAATGTTAGTGATAATTCGACGTTTAAAGGG
ATTTTGAATATCTCTGATACGGTAACTGGGGTTAACGGTCAGACATTTAACAGCTCGGCAGAATTAATGGCCTATGTGGC
TGATTTGGATTTAGGGTCTGAAGTAACTGTTCAATATACATCAGACGGCGAAGCAAAAGAAGCCACAGGAAAAATTATTG
AATTGTCAAATGGAAAAAATGGTATCGGAATCGGTTTGGTAGATCATACGTCGGTGTCATCAGATGTTGATGTTAATTTT
GATACGAGTGGTGTTGGTGGTCCAAGTGCTGGTTTGATGTTTACGCTTGATATTTATGACCAATTAAATAGTGAAGATTT
GCGTAAAGGTCGTAAAATTGCTGGTACAGGTACGATTGAATCAGATGGTTCAGTCGGGGATATTGGTGGCGCAGCACTTA
AAGTTGTTGCTGCTGCTAAAGCTGGTGCAGATATTTTCTTTGTTCCAAATAACCCTGTGGATGAGGAAACATTGAAAAAA
GACCCAGATGCGAAAACGAACTATGAAGAAGCTGTCGCAGCTGCTAAAGACCTCGATACCGATATGAAAATCGTTCCAGT
CACAACTGTTCAAGAAGCAATTGACTATCTGCGAAATAATGATTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

67.742

94.46

0.64


Multiple sequence alignment