Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   ACMXYH_RS30460 Genome accession   NZ_CP180479
Coordinates   6600984..6601388 (-) Length   134 a.a.
NCBI ID   WP_008152601.1    Uniprot ID   -
Organism   Pseudomonas sp. ZB1P45     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 6595984..6606388
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACMXYH_RS30445 - 6597788..6599845 (-) 2058 WP_134420664.1 methyl-accepting chemotaxis protein -
  ACMXYH_RS30450 - 6600002..6600550 (-) 549 WP_129440362.1 chemotaxis protein CheW -
  ACMXYH_RS30455 pilH 6600561..6600926 (-) 366 WP_008068134.1 twitching motility response regulator PilH -
  ACMXYH_RS30460 pilG 6600984..6601388 (-) 405 WP_008152601.1 twitching motility response regulator PilG Regulator
  ACMXYH_RS30465 gshB 6601623..6602576 (+) 954 WP_056738965.1 glutathione synthase -
  ACMXYH_RS30470 - 6602654..6603553 (+) 900 WP_415765830.1 TonB family protein -
  ACMXYH_RS30475 - 6603688..6604260 (+) 573 WP_046045231.1 YqgE/AlgH family protein -
  ACMXYH_RS30480 ruvX 6604260..6604697 (+) 438 WP_415765831.1 Holliday junction resolvase RuvX -
  ACMXYH_RS30485 pyrR 6604782..6605285 (+) 504 WP_033060467.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  ACMXYH_RS30490 - 6605313..6606317 (+) 1005 WP_007897943.1 aspartate carbamoyltransferase catalytic subunit -

Sequence

Protein


Download         Length: 134 a.a.        Molecular weight: 14589.99 Da        Isoelectric Point: 7.2441

>NTDB_id=1096051 ACMXYH_RS30460 WP_008152601.1 6600984..6601388(-) (pilG) [Pseudomonas sp. ZB1P45]
MEQHSSALKVMVIDDSKTIRRTAETLLKNVGCEVITAIDGFDALAKIADNHPGIIFVDIMMPRLDGYQTCALIKNNSAFK
STPVIMLSSKDGLFDKAKGRIVGSDQFLTKPFSKEELLNAIQAHVPGFAAVLPQ

Nucleotide


Download         Length: 405 bp        

>NTDB_id=1096051 ACMXYH_RS30460 WP_008152601.1 6600984..6601388(-) (pilG) [Pseudomonas sp. ZB1P45]
ATGGAACAGCATTCCAGCGCCTTGAAGGTCATGGTAATCGACGATTCGAAAACGATTCGCCGCACCGCCGAAACGCTGTT
GAAGAACGTGGGTTGTGAAGTGATCACCGCCATCGATGGTTTCGATGCCCTGGCCAAGATTGCCGACAATCACCCCGGCA
TCATCTTTGTCGACATCATGATGCCGCGTCTGGATGGTTATCAGACCTGCGCTTTAATCAAGAACAACAGTGCGTTCAAG
TCCACGCCAGTGATTATGCTGTCGTCCAAGGACGGGCTGTTCGACAAGGCCAAGGGGCGCATCGTCGGCTCCGACCAGTT
TTTGACCAAGCCTTTCAGCAAGGAAGAACTGCTGAACGCGATCCAGGCCCATGTACCGGGCTTCGCCGCTGTTTTGCCGC
AGTAG

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

76

93.284

0.709

Multiple sequence alignment