Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   ACGHT2_RS02030 Genome accession   NZ_AP031455
Coordinates   360785..361510 (+) Length   241 a.a.
NCBI ID   WP_013851484.1    Uniprot ID   A0AAW6YMQ9
Organism   Streptococcus pasteurianus strain k46-0107-A9     
Function   export ComS (predicted from homology)   
Competence regulation

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type MGE coordinates Gene coordinates Relative position Distance (bp)
ICE 339345..362326 360785..361510 within 0


Gene organization within MGE regions


Location: 339345..362326
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACGHT2_RS01920 (K460107A9_03150) - 339380..340801 (+) 1422 WP_013851479.1 NCS2 family permease -
  ACGHT2_RS01925 (K460107A9_03160) - 341259..341573 (+) 315 WP_000420682.1 YdcP family protein -
  ACGHT2_RS01930 (K460107A9_03170) - 341589..341975 (+) 387 WP_000985015.1 YdcP family protein -
  ACGHT2_RS01935 (K460107A9_03180) - 342004..343389 (+) 1386 WP_000813488.1 FtsK/SpoIIIE domain-containing protein -
  ACGHT2_RS01940 - 343392..343544 (+) 153 WP_000879507.1 hypothetical protein -
  ACGHT2_RS01945 (K460107A9_03190) mobT 343567..344772 (+) 1206 WP_000398284.1 MobT family relaxase -
  ACGHT2_RS01950 (K460107A9_03200) - 344815..345036 (+) 222 WP_001009056.1 hypothetical protein -
  ACGHT2_RS01955 (K460107A9_03210) - 345153..345650 (+) 498 WP_000342539.1 antirestriction protein ArdA -
  ACGHT2_RS01960 (K460107A9_03220) - 345739..346131 (+) 393 WP_000723888.1 conjugal transfer protein -
  ACGHT2_RS01965 (K460107A9_03230) - 346115..348562 (+) 2448 WP_000331160.1 ATP-binding protein -
  ACGHT2_RS01970 (K460107A9_03240) - 348565..350742 (+) 2178 WP_000804748.1 CD3337/EF1877 family mobilome membrane protein -
  ACGHT2_RS01975 (K460107A9_03250) - 350739..351620 (+) 882 WP_006150747.1 lysozyme family protein -
  ACGHT2_RS01980 (K460107A9_03260) - 351617..352549 (+) 933 WP_001224318.1 conjugal transfer protein -
  ACGHT2_RS01985 - 352863..352910 (+) 48 Protein_332 hypothetical protein -
  ACGHT2_RS01990 (K460107A9_03270) tet(M) 352926..354845 (+) 1920 WP_058692378.1 tetracycline resistance ribosomal protection protein Tet(M) -
  ACGHT2_RS01995 (K460107A9_03280) tet(L) 354943..356316 (+) 1374 WP_057498846.1 tetracycline efflux MFS transporter Tet(L) -
  ACGHT2_RS02000 (K460107A9_03290) - 356938..357618 (-) 681 WP_001015311.1 IS6-like element IS1216 family transposase -
  ACGHT2_RS02005 (K460107A9_03300) tsaE 357768..358211 (+) 444 WP_003063385.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  ACGHT2_RS02010 (K460107A9_03310) - 358204..358716 (+) 513 WP_013851480.1 GNAT family N-acetyltransferase -
  ACGHT2_RS02015 (K460107A9_03320) - 358727..359884 (+) 1158 WP_003063388.1 biofilm formation/cell division transcriptional regulator BrpA -
  ACGHT2_RS02020 (K460107A9_03330) - 360003..360305 (-) 303 WP_003063390.1 hypothetical protein -
  ACGHT2_RS02025 (K460107A9_03340) - 360302..360721 (-) 420 WP_003063392.1 HIT family protein -
  ACGHT2_RS02030 (K460107A9_03350) pptA 360785..361510 (+) 726 WP_013851484.1 ABC transporter ATP-binding protein Regulator

Sequence

Protein


Download         Length: 241 a.a.        Molecular weight: 26764.09 Da        Isoelectric Point: 4.4838

>NTDB_id=109600 ACGHT2_RS02030 WP_013851484.1 360785..361510(+) (pptA) [Streptococcus pasteurianus strain k46-0107-A9]
MLKIENITGGYINIPVLKNISFEVGDGELIGLIGLNGAGKSTTINEIIGLLTPYQGQISIDGLTLAQNQAEYRKKIGFIP
ETPSLYEELTLREHLETVAMAYDLNYDEAMARATELLELFRLSDKLEWFPINFSKGMKQKVMIICAFMVNPSLFIVDEPF
LGLDPLAISDLTELLAQEKAKGKAILMSTHVLDAAEKMCDRFVILHQGKIRATGTLAELREAFGDETATLNDIYMSLTKE
V

Nucleotide


Download         Length: 726 bp        

>NTDB_id=109600 ACGHT2_RS02030 WP_013851484.1 360785..361510(+) (pptA) [Streptococcus pasteurianus strain k46-0107-A9]
ATGTTAAAAATTGAAAATATAACAGGGGGATATATTAACATCCCTGTCTTAAAAAATATTTCTTTTGAAGTTGGTGATGG
TGAGCTTATTGGCTTAATTGGTTTGAATGGGGCTGGTAAGTCAACGACAATCAATGAAATTATTGGGCTCTTAACGCCAT
ATCAAGGGCAAATTTCGATTGATGGTTTGACTTTGGCGCAGAATCAGGCAGAATATCGTAAGAAAATTGGATTTATCCCA
GAAACGCCAAGTTTATATGAAGAATTGACTTTACGTGAACATTTAGAAACAGTTGCAATGGCTTATGACCTTAATTATGA
TGAGGCGATGGCGCGTGCGACAGAATTGTTGGAACTTTTCCGTTTATCTGATAAATTAGAGTGGTTTCCGATTAATTTCT
CTAAAGGGATGAAGCAGAAGGTCATGATTATTTGTGCCTTTATGGTTAATCCAAGTTTGTTTATCGTTGATGAGCCCTTT
TTGGGCTTGGACCCATTAGCAATTTCTGATTTGACAGAATTATTGGCGCAAGAAAAGGCAAAAGGAAAAGCGATTTTGAT
GTCAACACACGTTTTGGATGCTGCTGAAAAGATGTGTGACCGTTTTGTGATTTTGCATCAAGGGAAAATTCGTGCAACTG
GTACATTAGCAGAGCTACGTGAAGCATTTGGTGATGAGACAGCAACGCTTAATGATATTTATATGTCATTGACTAAAGAG
GTGTGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

79.079

99.17

0.784
  pptA Streptococcus thermophilus LMD-9

78.661

99.17

0.78

Multiple sequence alignment