Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   ACMX8W_RS07695 Genome accession   NZ_CP180439
Coordinates   1470427..1470891 (-) Length   154 a.a.
NCBI ID   WP_003232406.1    Uniprot ID   G4NVM0
Organism   Bacillus subtilis strain Z-294     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1465427..1475891
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACMX8W_RS07675 (ACMX8W_07675) kinA 1465894..1467714 (+) 1821 WP_047182543.1 sporulation histidine kinase KinA -
  ACMX8W_RS07680 (ACMX8W_07680) dapX 1467724..1468905 (-) 1182 WP_014476653.1 aminotransferase A -
  ACMX8W_RS07685 (ACMX8W_07685) - 1469107..1469268 (-) 162 WP_003245246.1 hypothetical protein -
  ACMX8W_RS07690 (ACMX8W_07690) cheV 1469472..1470383 (+) 912 WP_014476655.1 chemotaxis protein CheV -
  ACMX8W_RS07695 (ACMX8W_07695) kre 1470427..1470891 (-) 465 WP_003232406.1 YkyB family protein Regulator
  ACMX8W_RS07700 (ACMX8W_07700) ykuC 1471017..1472309 (-) 1293 WP_047182544.1 MFS transporter -
  ACMX8W_RS07705 (ACMX8W_07705) ltdD 1472385..1472879 (-) 495 WP_072174092.1 L,D-transpeptidase family protein -
  ACMX8W_RS07710 (ACMX8W_07710) ppeE 1472936..1473796 (-) 861 WP_047182545.1 metallophosphoesterase -
  ACMX8W_RS07715 (ACMX8W_07715) fadH 1473939..1474703 (+) 765 WP_015383534.1 2,4-dienoyl-CoA reductase -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17895.71 Da        Isoelectric Point: 10.3545

>NTDB_id=1095867 ACMX8W_RS07695 WP_003232406.1 1470427..1470891(-) (kre) [Bacillus subtilis strain Z-294]
MDDHAYTKDLQPTVENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSKNPRFSQQQSDVLISIGD
YYFHMPPTKEDFEHLPHLGTLNQSYRNPKAQMSLTKAKHLLQEYVGMKEKPLVPNRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=1095867 ACMX8W_RS07695 WP_003232406.1 1470427..1470891(-) (kre) [Bacillus subtilis strain Z-294]
ATGGACGACCATGCATATACGAAAGATCTGCAGCCAACCGTAGAAAATCTTTCAAAAGCAGTTTACACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTATATCTGCTGAAAAAACGGGCTTTGCAAAAGCTTGTCAAAGAAGGTAAAG
GAAAGAAAATAGGGCTTCATTTTTCAAAAAATCCAAGGTTCAGCCAACAGCAATCGGACGTGCTTATCTCAATCGGAGAC
TACTATTTTCACATGCCTCCAACTAAAGAAGACTTCGAACATCTTCCGCATTTAGGTACACTTAATCAATCGTACCGAAA
TCCTAAAGCTCAAATGTCTTTAACAAAAGCGAAACACCTATTGCAAGAATATGTCGGCATGAAAGAAAAGCCGCTAGTGC
CAAATCGCCAGCAGCCAGCTTACCATAAACCGGTCTTTAAAAAACTTGGCGAGAGTTACTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NVM0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment