Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   ACMX8W_RS04615 Genome accession   NZ_CP180439
Coordinates   909832..910626 (+) Length   264 a.a.
NCBI ID   WP_047182313.1    Uniprot ID   -
Organism   Bacillus subtilis strain Z-294     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 904832..915626
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACMX8W_RS04585 (ACMX8W_04585) sxzA 905671..906702 (+) 1032 WP_047182309.1 FecCD family ABC transporter permease -
  ACMX8W_RS04590 (ACMX8W_04590) yfhB 906817..907698 (+) 882 WP_047182310.1 PhzF family phenazine biosynthesis isomerase -
  ACMX8W_RS04595 (ACMX8W_04595) yfhC 907786..908370 (+) 585 WP_047182311.1 nitroreductase -
  ACMX8W_RS04600 (ACMX8W_04600) yfhD 908409..908600 (-) 192 WP_014479215.1 YfhD family protein -
  ACMX8W_RS04605 (ACMX8W_04605) yfhE 908667..908777 (-) 111 WP_003223230.1 YfhE family protein -
  ACMX8W_RS04610 (ACMX8W_04610) yfhF 908832..909743 (-) 912 WP_047182312.1 TIGR01777 family oxidoreductase -
  ACMX8W_RS04615 (ACMX8W_04615) recX 909832..910626 (+) 795 WP_047182313.1 recombination regulator RecX Regulator
  ACMX8W_RS04620 (ACMX8W_04620) yfhH 910628..910942 (+) 315 WP_047182314.1 YfhH family protein -
  ACMX8W_RS04625 (ACMX8W_04625) yfhI 911086..912279 (+) 1194 WP_192852118.1 MFS transporter -
  ACMX8W_RS04630 (ACMX8W_04630) sspK 912311..912463 (-) 153 WP_003223241.1 small, acid-soluble spore protein K -
  ACMX8W_RS04635 (ACMX8W_04635) yfhJ 912588..912857 (+) 270 WP_003243789.1 YfhJ family protein -
  ACMX8W_RS04640 (ACMX8W_04640) yfhK 913002..913520 (+) 519 WP_047182316.1 SH3 domain-containing protein -
  ACMX8W_RS04645 (ACMX8W_04645) spdL 913605..913937 (+) 333 WP_041517766.1 SdpC immunity protein SpdL -
  ACMX8W_RS04650 (ACMX8W_04650) ephM 913924..914784 (+) 861 WP_047182317.1 epoxide hydrolase EphM -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 31043.26 Da        Isoelectric Point: 6.6686

>NTDB_id=1095850 ACMX8W_RS04615 WP_047182313.1 909832..910626(+) (recX) [Bacillus subtilis strain Z-294]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRTKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKELKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=1095850 ACMX8W_RS04615 WP_047182313.1 909832..910626(+) (recX) [Bacillus subtilis strain Z-294]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGCGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGACCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAACGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAAGATCAGACAAGAGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACGAAAGAACTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACAG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATGAAG
GTCAAACAATTTTTATTCCGTAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

99.621

100

0.996

Multiple sequence alignment