Detailed information NTG1095833

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: ACMX77_RS20390
• Genome accession: NZ_CP180438
• Coordinates: 3891696..3892841 (+)
• Length: 381 a.a.
• NCBI ID: WP_047183349.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain W-2
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3886696..3897841

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACMX77_RS20365 (ACMX77_20365)	albF	3886714..3887994 (+)	1281	WP_415749591.1	M16 family metallopeptidase	-
ACMX77_RS20370 (ACMX77_20370)	albG	3887991..3888692 (+)	702	WP_015384931.1	antilisterial bacteriocin subtilosin biosynthesis protein AlbG	-
ACMX77_RS20375 (ACMX77_20375)	ywhL	3888698..3890071 (-)	1374	Protein_3957	YncE family protein	-
ACMX77_RS20380 (ACMX77_20380)	ywhK	3890111..3891466 (-)	1356	WP_047183347.1	YncE family protein	-
ACMX77_RS20385 (ACMX77_20385)	-	3891463..3891693 (-)	231	WP_047183348.1	hypothetical protein	-
ACMX77_RS20390 (ACMX77_20390)	rapF	3891696..3892841 (+)	1146	WP_047183349.1	response regulator aspartate phosphatase RapF	Regulator
ACMX77_RS20395 (ACMX77_20395)	phrF	3892825..3892944 (+)	120	WP_041334633.1	phosphatase RapF inhibitor PhrF	Regulator
ACMX77_RS20400 (ACMX77_20400)	-	3893042..3893506 (+)	465	WP_047183350.1	YbaK/EbsC family protein	-
ACMX77_RS20405 (ACMX77_20405)	speB	3893543..3894415 (-)	873	WP_003227545.1	agmatinase	-
ACMX77_RS20410 (ACMX77_20410)	speE	3894476..3895306 (-)	831	WP_003227543.1	spermidine synthase	-
ACMX77_RS20415 (ACMX77_20415)	pbpG	3895508..3897583 (+)	2076	WP_047183351.1	transglycosylase domain-containing protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45689.15 Da
• Isoelectric Point: 5.0678

>NTDB_id=1095833 ACMX77_RS20390 WP_047183349.1 3891696..3892841(+) (rapF) [Bacillus subtilis strain W-2]
MTGVISSSSIGEKINEWYMYIRRFSIPDAEYLRREIKQELDHMEEDQDLHLYYSLMEFRHNLMLEYLEPLEKMRIEEQPR
LSDLLLEIDKKQARLTGLLEYYFNFFRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFS
MDYARQAYEIYKENEAYNIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYED
AITYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKMDKAHEYHSKGMAYSQKAEDVIYLSEFEFLKSLYLSGPDEEAI
QGFFDFLESKMLYADLEDFAIDVAKYYHERKNFQKASAYFLKVEQVRQLIQGGVSLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=1095833 ACMX77_RS20390 WP_047183349.1 3891696..3892841(+) (rapF) [Bacillus subtilis strain W-2]
GTGACAGGTGTCATATCTTCTTCTTCCATCGGAGAAAAGATTAACGAATGGTATATGTACATACGCCGATTTAGCATACC
CGATGCAGAATATTTGCGACGAGAAATCAAGCAAGAGCTGGATCACATGGAAGAAGATCAAGACCTTCATTTGTACTATT
CACTAATGGAGTTTCGGCACAACCTGATGCTTGAGTACCTTGAACCGTTAGAAAAAATGAGGATTGAGGAACAGCCGAGA
CTGTCTGATCTGCTGCTTGAGATTGATAAAAAACAGGCTCGTTTAACTGGTCTGCTTGAGTACTATTTTAATTTCTTCAG
AGGCATGTATGAGCTGGACCAGCGGGAATATCTGTCGGCTATTAAATTTTTCAAAAAGGCCGAAAGCAAGCTGATATTCG
TTAAGGATCGGATAGAGAAAGCTGAGTTTTTCTTTAAGATGTCTGAATCTTATTACTATATGAAACAAACGTATTTTTCA
ATGGACTATGCACGGCAAGCATATGAAATATACAAAGAAAATGAAGCTTATAATATAAGATTGCTGCAGTGTCATTCTTT
ATTTGCCACCAATTTTTTAGATTTAAAACAGTATGAGGATGCCATCTCACATTTTCAAAAAGCTTATTCTATGGCAGAAG
CTGAAAAGCAGCCCCAATTAATGGGAAGAACTTTGTACAATATCGGGCTTTGTAAAAACAGCCAAAGCCAATATGAGGAT
GCCATAACTTATTTCAAAAGAGCAATAGCTGTTTTTGAAGAATCAAATATTCTTCCTTCCTTACCTCAAGCGTATTTTTT
AATTACACAGATCCATTATAAATTAGGAAAAATGGATAAAGCTCATGAATATCATAGTAAGGGAATGGCTTATTCACAAA
AGGCCGAAGATGTAATATATTTATCAGAGTTTGAATTTTTGAAATCTTTATACTTATCAGGCCCGGATGAAGAAGCAATT
CAAGGATTTTTTGATTTTCTCGAAAGTAAAATGTTGTATGCTGATCTTGAAGATTTCGCTATTGATGTGGCAAAATATTA
TCATGAACGTAAAAATTTTCAAAAAGCTTCTGCTTATTTTTTGAAGGTGGAACAAGTAAGGCAACTTATTCAAGGAGGAG
TGAGTTTGTATGAAATTGAAGTCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-290)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

• Anaphase-promoting complex, cyclosome, subunit 3 (ANAPC3) (132-208)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	98.688	100	0.987
rapC	Bacillus subtilis subsp. subtilis str. 168	57.632	99.738	0.575