Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   ACMX77_RS06185 Genome accession   NZ_CP180438
Coordinates   1193992..1194183 (+) Length   63 a.a.
NCBI ID   WP_003224559.1    Uniprot ID   G4NWD2
Organism   Bacillus subtilis strain W-2     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1188992..1199183
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACMX77_RS06155 (ACMX77_06155) argF 1189855..1190814 (+) 960 WP_047182424.1 ornithine carbamoyltransferase -
  ACMX77_RS06160 (ACMX77_06160) yjzC 1190900..1191079 (+) 180 WP_003245356.1 YjzC family protein -
  ACMX77_RS06165 (ACMX77_06165) yjzD 1191125..1191310 (-) 186 WP_003245236.1 YjzD family protein -
  ACMX77_RS06170 (ACMX77_06170) - 1191561..1192295 (+) 735 WP_015483082.1 hypothetical protein -
  ACMX77_RS06175 (ACMX77_06175) - 1192377..1192934 (+) 558 WP_047182425.1 hypothetical protein -
  ACMX77_RS06180 (ACMX77_06180) med 1193024..1193977 (+) 954 WP_047182426.1 transcriptional regulator Med Regulator
  ACMX77_RS06185 (ACMX77_06185) comZ 1193992..1194183 (+) 192 WP_003224559.1 ComG operon transcriptional repressor ComZ Regulator
  ACMX77_RS06190 (ACMX77_06190) yjzB 1194213..1194449 (-) 237 WP_015383342.1 spore coat protein YjzB -
  ACMX77_RS06195 (ACMX77_06195) fabH 1194614..1195552 (+) 939 WP_015483083.1 beta-ketoacyl-ACP synthase III -
  ACMX77_RS06200 (ACMX77_06200) fabF 1195575..1196816 (+) 1242 WP_003244890.1 beta-ketoacyl-ACP synthase II -
  ACMX77_RS06205 (ACMX77_06205) yjaZ 1196892..1197677 (+) 786 WP_015383343.1 DUF2268 domain-containing protein -
  ACMX77_RS06210 (ACMX77_06210) appD 1197869..1198855 (+) 987 WP_047182427.1 oligopeptide ABC transporter ATP-binding protein AppD -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7214.27 Da        Isoelectric Point: 4.2564

>NTDB_id=1095780 ACMX77_RS06185 WP_003224559.1 1193992..1194183(+) (comZ) [Bacillus subtilis strain W-2]
MQHEKSLEFLQIAMKYLPEAKEQLEKSGIELSMEAIQPFMNLFTTVMAEAYELGKSDAKSETE

Nucleotide


Download         Length: 192 bp        

>NTDB_id=1095780 ACMX77_RS06185 WP_003224559.1 1193992..1194183(+) (comZ) [Bacillus subtilis strain W-2]
ATGCAGCACGAAAAATCACTTGAATTCTTGCAAATTGCCATGAAATATCTCCCTGAAGCGAAAGAACAGCTTGAGAAATC
AGGCATTGAGCTCTCAATGGAGGCCATCCAGCCGTTTATGAATCTATTTACAACGGTAATGGCGGAAGCTTATGAGCTTG
GCAAGTCTGACGCTAAATCTGAAACAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NWD2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment