Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   ACMX2G_RS15985 Genome accession   NZ_CP180375
Coordinates   3126128..3126592 (-) Length   154 a.a.
NCBI ID   WP_003154622.1    Uniprot ID   A0A9Q3QIJ3
Organism   Bacillus velezensis strain NJN-6     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 3121128..3131592
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACMX2G_RS15965 (ACMX2G_15965) - 3121608..3123428 (+) 1821 WP_015417363.1 PAS domain-containing protein -
  ACMX2G_RS15970 (ACMX2G_15970) - 3123404..3124623 (-) 1220 Protein_3077 aminotransferase A -
  ACMX2G_RS15975 (ACMX2G_15975) - 3124824..3124985 (-) 162 WP_007409608.1 hypothetical protein -
  ACMX2G_RS15980 (ACMX2G_15980) cheV 3125174..3126085 (+) 912 WP_007409609.1 chemotaxis protein CheV -
  ACMX2G_RS15985 (ACMX2G_15985) kre 3126128..3126592 (-) 465 WP_003154622.1 YkyB family protein Regulator
  ACMX2G_RS15990 (ACMX2G_15990) - 3126715..3128007 (-) 1293 WP_024085236.1 MFS transporter -
  ACMX2G_RS15995 (ACMX2G_15995) - 3128083..3128577 (-) 495 WP_088037173.1 L,D-transpeptidase family protein -
  ACMX2G_RS16000 (ACMX2G_16000) - 3128652..3129515 (-) 864 WP_024085238.1 metallophosphoesterase -
  ACMX2G_RS16005 (ACMX2G_16005) fadH 3129659..3130423 (+) 765 WP_003154618.1 2,4-dienoyl-CoA reductase -
  ACMX2G_RS16010 (ACMX2G_16010) - 3130533..3131078 (+) 546 Protein_3085 hypothetical protein -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17784.55 Da        Isoelectric Point: 10.4864

>NTDB_id=1095507 ACMX2G_RS15985 WP_003154622.1 3126128..3126592(-) (kre) [Bacillus velezensis strain NJN-6]
MDDHAYSKELQPTIENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSNNPRFSQQQSDVLISIGD
YYFHMPPTKEDFQHLPHLGTLNQSYRNPKAQMSLTKAKNVLQKYVGLKEKPLAANRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=1095507 ACMX2G_RS15985 WP_003154622.1 3126128..3126592(-) (kre) [Bacillus velezensis strain NJN-6]
ATGGACGACCACGCTTATTCGAAAGAGCTGCAGCCAACCATCGAGAATCTTTCAAAAGCTGTTTATACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTTTATCTGCTGAAAAAACGGGCATTACAAAAGCTTGTGAAAGAAGGCAAAG
GGAAAAAAATAGGGCTTCACTTTTCAAATAATCCCAGGTTTAGCCAACAGCAGTCAGACGTACTTATCTCTATCGGAGAC
TACTATTTTCACATGCCTCCAACAAAAGAAGACTTCCAGCATCTTCCGCATTTAGGTACGTTAAATCAATCGTACCGCAA
TCCTAAAGCACAAATGTCTTTGACAAAAGCGAAAAACGTATTGCAAAAATATGTGGGCTTAAAGGAAAAACCGCTTGCCG
CCAACAGGCAGCAGCCCGCTTATCATAAACCCGTATTTAAAAAACTTGGTGAGAGTTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(13-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

92.857

100

0.929

Multiple sequence alignment