Detailed information    

insolico Bioinformatically predicted

Overview


Name   spo0A   Type   Regulator
Locus tag   ACLBK2_RS20890 Genome accession   NZ_CP180236
Coordinates   4028569..4029363 (-) Length   264 a.a.
NCBI ID   WP_033686380.1    Uniprot ID   A0A4Y6EYG5
Organism   Bacillus sp. Ba 3     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context


Location: 4023569..4034363
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACLBK2_RS20870 (ACLBK2_20870) - 4025357..4025590 (+) 234 WP_001190188.1 DUF2627 domain-containing protein -
  ACLBK2_RS20875 (ACLBK2_20875) - 4025642..4026370 (-) 729 WP_048531043.1 glycerophosphodiester phosphodiesterase -
  ACLBK2_RS20880 (ACLBK2_20880) - 4026421..4026567 (+) 147 WP_001247671.1 YycC family protein -
  ACLBK2_RS20885 (ACLBK2_20885) - 4026756..4028282 (-) 1527 WP_048531045.1 glycosyltransferase family 39 protein -
  ACLBK2_RS20890 (ACLBK2_20890) spo0A 4028569..4029363 (-) 795 WP_033686380.1 sporulation transcription factor Spo0A Regulator
  ACLBK2_RS20895 (ACLBK2_20895) spoIVB 4029651..4030949 (-) 1299 WP_048531049.1 SpoIVB peptidase -
  ACLBK2_RS20900 (ACLBK2_20900) recN 4031068..4032807 (-) 1740 WP_166688062.1 DNA repair protein RecN Machinery gene
  ACLBK2_RS20905 (ACLBK2_20905) argR 4033075..4033524 (-) 450 WP_001032581.1 arginine repressor ArgR -

Sequence


Protein


Download         Length: 264 a.a.        Molecular weight: 29454.20 Da        Isoelectric Point: 7.4718

>NTDB_id=1094854 ACLBK2_RS20890 WP_033686380.1 4028569..4029363(-) (spo0A) [Bacillus sp. Ba 3]
MEKIKVCLVDDNKELVSMLESYVAAQDDMEVIGTAYNGQECLNLLKDKQPDVLVLDIIMPHLDGLAVLEKMRHIERLRQP
SVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLTSHIRQVSGKANATIKRPLPSFRSATTIDGKPKNLDASITSIIHE
IGVPAHIKGYMYLREAISMVYNDIELLGSITKVLYPDIAKKYNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTVSMS
KAKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 795 bp        

>NTDB_id=1094854 ACLBK2_RS20890 WP_033686380.1 4028569..4029363(-) (spo0A) [Bacillus sp. Ba 3]
GTGGAGAAAATTAAAGTATGTCTTGTGGATGATAATAAAGAATTAGTATCAATGCTAGAGAGTTATGTTGCTGCTCAAGA
TGATATGGAAGTAATCGGTACTGCTTATAATGGTCAAGAGTGTTTAAATTTATTAAAAGACAAGCAGCCGGATGTACTTG
TTTTAGACATTATTATGCCACATTTAGATGGATTAGCTGTATTAGAGAAAATGCGACATATTGAAAGGCTAAGACAGCCT
AGCGTAATTATGTTGACAGCATTTGGACAAGAAGATGTGACGAAAAAAGCAGTTGACTTAGGTGCTTCATATTTCATATT
AAAACCATTTGATATGGAGAATTTAACGAGTCATATTCGTCAAGTAAGCGGTAAAGCGAACGCTACTATTAAACGTCCAC
TTCCATCTTTCCGTTCAGCAACGACAATAGATGGAAAGCCGAAAAACTTAGATGCAAGCATTACGAGTATCATTCATGAA
ATTGGTGTGCCTGCTCATATTAAAGGGTATATGTACTTAAGGGAAGCGATCTCTATGGTGTACAACGATATCGAATTACT
TGGATCTATTACGAAAGTATTGTATCCAGATATTGCAAAGAAATATAATACAACAGCAAGCCGTGTTGAGCGAGCAATCC
GTCATGCGATTGAAGTAGCATGGAGTCGTGGGAATATTGATTCTATTTCGTCTTTATTCGGTTATACAGTATCTATGTCA
AAAGCAAAACCTACGAACTCCGAGTTCATTGCAATGGTTGCGGATAAGTTGAGACTTGAACATAAGGCTAGTTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A4Y6EYG5

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

80.899

100

0.818


Multiple sequence alignment