Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   ACLBK2_RS19985 Genome accession   NZ_CP180236
Coordinates   3867019..3867477 (+) Length   152 a.a.
NCBI ID   WP_000804864.1    Uniprot ID   -
Organism   Bacillus sp. Ba 3     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 3862019..3872477
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACLBK2_RS19970 (ACLBK2_19970) - 3862690..3862926 (+) 237 WP_048530745.1 hypothetical protein -
  ACLBK2_RS19975 (ACLBK2_19975) - 3863086..3865194 (-) 2109 WP_048530747.1 polyphosphate kinase -
  ACLBK2_RS19980 (ACLBK2_19980) ppx 3865303..3866841 (-) 1539 WP_071758746.1 exopolyphosphatase -
  ACLBK2_RS19985 (ACLBK2_19985) kre 3867019..3867477 (+) 459 WP_000804864.1 YkyB family protein Regulator
  ACLBK2_RS19990 (ACLBK2_19990) - 3867509..3868171 (-) 663 WP_247998511.1 YkyA family protein -
  ACLBK2_RS19995 (ACLBK2_19995) - 3868815..3869456 (-) 642 WP_247998512.1 diguanylate cyclase domain-containing protein -
  ACLBK2_RS20000 (ACLBK2_20000) - 3869621..3869854 (+) 234 WP_071758744.1 phage holin -
  ACLBK2_RS20005 (ACLBK2_20005) - 3869887..3870387 (-) 501 WP_166688096.1 hypothetical protein -
  ACLBK2_RS20010 (ACLBK2_20010) - 3870791..3872332 (+) 1542 WP_071758742.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 152 a.a.        Molecular weight: 17757.49 Da        Isoelectric Point: 10.6793

>NTDB_id=1094852 ACLBK2_RS19985 WP_000804864.1 3867019..3867477(+) (kre) [Bacillus sp. Ba 3]
MKPSQPQSQLQNQHSINRLAQSIFVVNRHAKAATNPKYLYWLKKTALERLIAEKKAIKEGLHFSRNPRFSQQQSDVLIRL
GDYFFHIPPTKEDFRILPHLGHLESSYRNPKTTLSLTVAKKTLQDYIGPEALKQEKKLSEPVPWYSRTYTKK

Nucleotide


Download         Length: 459 bp        

>NTDB_id=1094852 ACLBK2_RS19985 WP_000804864.1 3867019..3867477(+) (kre) [Bacillus sp. Ba 3]
ATGAAACCTTCACAACCACAATCTCAATTACAAAACCAACATTCTATTAATCGACTAGCTCAATCTATTTTCGTTGTGAA
TCGTCATGCTAAAGCTGCAACTAATCCGAAGTATTTATACTGGTTAAAAAAGACGGCTTTAGAACGCTTAATTGCTGAAA
AAAAAGCTATTAAAGAAGGATTACATTTTTCTAGAAATCCACGTTTTAGCCAACAACAATCCGATGTTCTTATACGTTTA
GGTGATTATTTTTTCCATATTCCTCCTACCAAAGAAGATTTTCGAATCCTACCACACCTTGGCCATCTTGAATCCTCCTA
TCGAAATCCGAAAACAACCTTATCTTTAACAGTAGCAAAAAAGACACTTCAAGATTACATTGGTCCTGAAGCACTGAAAC
AAGAAAAAAAATTAAGTGAACCTGTCCCGTGGTATAGTCGTACGTATACAAAAAAATAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(16-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

64.655

76.316

0.493

Multiple sequence alignment