Detailed information NTG1094835

Bioinformatically predicted

Overview

• Name: clpC
• Type: Regulator
• Locus tag: ACLBK2_RS06070
• Genome accession: NZ_CP180236
• Coordinates: 1162914..1165514 (+)
• Length: 866 a.a.
• NCBI ID: WP_098344752.1
• Uniprot ID: -
• Organism: Bacillus sp. Ba 3
• Function: degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 1157914..1170514

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACLBK2_RS06035 (ACLBK2_06035)	prsA	1158676..1159533 (-)	858	WP_216475465.1	peptidylprolyl isomerase PrsA	-
ACLBK2_RS06040 (ACLBK2_06040)	-	1159663..1159794 (-)	132	WP_001120847.1	DUF3941 domain-containing protein	-
ACLBK2_RS06045 (ACLBK2_06045)	-	1159895..1160752 (+)	858	WP_071758300.1	YitT family protein	-
ACLBK2_RS06050 (ACLBK2_06050)	-	1160778..1160975 (-)	198	WP_002194664.1	DUF3813 domain-containing protein	-
ACLBK2_RS06055 (ACLBK2_06055)	-	1160976..1161116 (-)	141	WP_000516816.1	hypothetical protein	-
ACLBK2_RS06060 (ACLBK2_06060)	-	1161222..1162031 (-)	810	WP_001041237.1	Cof-type HAD-IIB family hydrolase	-
ACLBK2_RS06065 (ACLBK2_06065)	-	1162524..1162703 (+)	180	WP_000531421.1	YjzC family protein	-
ACLBK2_RS06070 (ACLBK2_06070)	clpC	1162914..1165514 (+)	2601	WP_098344752.1	ATP-dependent chaperone ClpB	Regulator
ACLBK2_RS06075 (ACLBK2_06075)	-	1165548..1165730 (-)	183	WP_001211116.1	YjzD family protein	-
ACLBK2_RS06080 (ACLBK2_06080)	-	1165887..1166621 (+)	735	WP_048526692.1	hydrolase	-
ACLBK2_RS06085 (ACLBK2_06085)	-	1166651..1167523 (+)	873	WP_052904089.1	NAD-dependent epimerase/dehydratase family protein	-
ACLBK2_RS06090 (ACLBK2_06090)	comZ	1167577..1167753 (+)	177	WP_048527481.1	ComZ family protein	Regulator
ACLBK2_RS06095 (ACLBK2_06095)	fabH	1168155..1169087 (+)	933	WP_001100534.1	beta-ketoacyl-ACP synthase III	-
ACLBK2_RS06100 (ACLBK2_06100)	fabF	1169119..1170357 (+)	1239	WP_000412652.1	beta-ketoacyl-ACP synthase II	-

Sequence

Protein

• Length: 866 a.a.
• Molecular weight: 97424.43 Da
• Isoelectric Point: 5.1949

>NTDB_id=1094835 ACLBK2_RS06070 WP_098344752.1 1162914..1165514(+) (clpC) [Bacillus sp. Ba 3]
MDLNQMTTKTQEAIMSAQSLAVSHHHQEVDTVHLLFTLLEEQDGLAVRIFQKMNVDIEALKQGAESLIKKKPSVTGSGAE
AGKLYITGALQQLLVRAGKEAEKLQDDYISVEHVLLAFSEEKGDINQLFTRFHITKDNLLQSLMTVRGNQRVTSQNPEAT
YEALEKYGRDLVAEVRAGKIDPVIGRDSEIRRVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVKKDVPEGLKDRTI
FALDMSALVAGAKFRGEFEERLQAVLNEIKKSEGRILLFIDELHTIVGAGKTEGAMDAGNMLKPMLARGELHCIGATTLD
EYRKYIEKDPALERRFQQVLAEEPTVEDTISILRGLKERFEIYHGVNIHDRAIVAASVLSDRYISDRFLPDKAIDLVDEA
CATIRTEIDSMPTELDEVTRRIMQLEIEEAALGKEKDFGSQERLKTLQRELSDLKEVASGMRAKWEKEKEDIHKVRDLRE
HLERLRRELEEAEGNYDLNKAAELRHGKIPAIEKELKEAEEMGAHNKQENRLLREEVSEEEIADIVSRWTGIPVAKLVEG
EREKLLRLEQILSERVIGQEEAVSLVSDAVLRARAGIKDPNRPIGSFIFLGPTGVGKTELAKTLAQSLFDSEEQMIRIDM
SEYMEKHAVSRLIGAPPGYVGYEEGGQLTEAVRRKPYSVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDFKNTVI
IMTSNIGSAHLLDGLEADGSIKEESRELVMGQLRGHFRPEFLNRVDEIILFKPLTTNEIKGIVDKIVKELQGRLADRHIT
VELTDAAKEFVVEAGFDPMYGARPLKRYVQRQVETKLARELIAGTITDNSHVVVDVENNELVVHVK

Nucleotide

• Length: 2601 bp

>NTDB_id=1094835 ACLBK2_RS06070 WP_098344752.1 1162914..1165514(+) (clpC) [Bacillus sp. Ba 3]
ATGGACTTAAATCAAATGACAACGAAAACACAAGAGGCGATTATGAGTGCCCAATCTTTAGCGGTGTCTCATCATCATCA
AGAAGTAGATACTGTTCATCTCTTGTTTACATTATTAGAAGAGCAAGATGGGTTAGCAGTACGTATTTTTCAAAAAATGA
ATGTCGATATAGAAGCGTTAAAACAAGGTGCTGAAAGTTTAATTAAGAAAAAGCCTTCTGTAACGGGAAGTGGTGCAGAA
GCAGGTAAATTATATATAACAGGTGCTCTGCAACAACTACTTGTAAGAGCGGGAAAAGAAGCAGAAAAATTGCAAGATGA
CTACATTTCAGTCGAGCATGTATTGCTTGCTTTTTCTGAAGAAAAAGGCGATATCAATCAATTATTCACAAGATTTCATA
TTACGAAAGATAACTTATTACAGTCTTTAATGACAGTTCGGGGGAATCAAAGAGTGACTAGTCAAAATCCAGAAGCAACT
TATGAAGCTTTAGAAAAATATGGCCGTGATTTAGTGGCGGAAGTAAGAGCGGGGAAAATTGACCCTGTTATCGGCCGCGA
TAGTGAAATTCGCCGTGTAATCCGCATTCTTTCACGTAAAACGAAAAACAACCCGGTTTTAATTGGTGAGCCAGGTGTTG
GTAAAACAGCGATCGTTGAAGGATTAGCACAGCGTATTGTGAAGAAGGATGTGCCTGAAGGATTAAAAGATAGAACAATC
TTTGCATTAGATATGAGTGCGCTTGTAGCTGGAGCGAAATTCCGTGGTGAATTTGAAGAGCGTCTACAAGCTGTATTAAA
TGAAATTAAAAAGAGTGAAGGCCGCATTTTATTATTCATTGATGAACTTCATACAATCGTCGGCGCTGGTAAAACAGAAG
GTGCGATGGACGCAGGGAATATGTTAAAACCGATGCTTGCACGTGGTGAACTGCATTGTATCGGGGCGACGACGCTCGAT
GAATATCGTAAATATATTGAGAAAGATCCGGCGCTAGAAAGACGTTTCCAACAAGTATTAGCAGAAGAACCAACTGTTGA
AGATACAATTTCCATTTTACGTGGTTTAAAAGAGCGTTTTGAAATTTATCACGGTGTAAATATTCACGACCGCGCGATTG
TAGCAGCATCTGTTTTATCAGATCGATATATTTCGGATCGTTTTTTACCAGATAAAGCAATTGATCTTGTCGACGAAGCA
TGCGCAACGATTCGTACAGAAATCGATTCTATGCCGACAGAATTAGATGAAGTAACGCGCCGCATTATGCAGTTGGAAAT
TGAAGAAGCGGCTCTTGGAAAAGAAAAGGACTTTGGTAGCCAAGAACGTCTAAAAACGTTGCAACGTGAATTATCAGATT
TAAAAGAAGTTGCAAGTGGTATGAGAGCGAAATGGGAAAAAGAAAAAGAAGATATTCACAAAGTTCGTGACTTACGTGAA
CATTTAGAGCGTCTGCGCCGTGAATTAGAAGAAGCAGAAGGGAATTACGATTTAAATAAAGCAGCGGAACTTCGCCACGG
AAAAATTCCTGCAATTGAAAAAGAGTTAAAAGAAGCAGAAGAAATGGGCGCACATAATAAACAAGAAAATCGTTTATTAC
GTGAGGAAGTAAGTGAAGAAGAAATTGCTGATATTGTTTCACGCTGGACTGGTATTCCTGTTGCAAAACTCGTTGAAGGT
GAACGTGAGAAATTACTACGCTTAGAGCAAATTTTATCAGAACGTGTCATCGGACAAGAGGAAGCGGTAAGCTTAGTATC
AGACGCAGTTCTTCGTGCGCGCGCTGGTATTAAAGACCCGAACCGTCCGATTGGTTCCTTCATTTTCTTAGGACCGACTG
GTGTTGGTAAAACAGAACTTGCAAAAACGTTAGCGCAGTCTCTATTCGATAGTGAAGAGCAAATGATTCGTATCGATATG
TCTGAGTATATGGAGAAACACGCTGTTTCACGCTTAATTGGTGCGCCTCCTGGATATGTTGGATATGAAGAGGGCGGTCA
ATTAACAGAAGCAGTAAGACGTAAACCGTATTCCGTTATTTTATTAGACGAAATCGAAAAAGCACATCCAGAAGTATTCA
ACATTTTATTACAAATGTTAGATGATGGGCGCATTACAGATTCGCAAGGACGTACAGTAGACTTTAAAAACACGGTTATT
ATTATGACTTCAAATATTGGATCTGCTCATTTATTAGATGGTTTAGAAGCAGATGGATCAATTAAAGAGGAATCAAGAGA
ACTTGTGATGGGGCAATTAAGAGGACATTTCCGACCAGAGTTTTTAAACCGTGTCGACGAAATTATTTTATTCAAACCTC
TTACAACGAATGAAATTAAAGGTATTGTTGATAAAATTGTAAAAGAATTACAAGGTCGTTTAGCTGACCGTCATATTACA
GTAGAATTAACAGACGCAGCGAAAGAATTTGTTGTAGAAGCTGGCTTTGATCCGATGTACGGAGCTCGTCCATTAAAACG
ATATGTACAGCGTCAAGTTGAGACGAAATTAGCGAGAGAATTAATTGCAGGAACGATTACTGATAACAGTCACGTAGTTG
TGGATGTAGAAAATAACGAATTAGTCGTTCATGTGAAATAA

Domains

Predicted by InterproScan.

• Clp amino terminal domain, pathogenicity island component (Clp_N) (17-68)

• Clp amino terminal domain, pathogenicity island component (Clp_N) (97-148)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (774-854)

• ATPase family associated with various cellular activities (AAA) (AAA) (206-339)

• AAA lid domain (AAA_lid_9) (345-447)

• AAA domain (Cdc48 subfamily) (AAA_2) (602-768)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpC	Bacillus subtilis subsp. subtilis str. 168	47.657	100	0.482
clpC	Lactococcus lactis subsp. cremoris KW2	47.199	82.448	0.389