Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   ACLBKY_RS06910 Genome accession   NZ_CP180233
Coordinates   1351359..1351940 (+) Length   193 a.a.
NCBI ID   WP_007498648.1    Uniprot ID   -
Organism   Bacillus altitudinis strain Ba 5     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1346359..1356940
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACLBKY_RS06885 (ACLBKY_06885) - 1347024..1348202 (+) 1179 WP_051005660.1 N-acetyldiaminopimelate deacetylase -
  ACLBKY_RS06890 (ACLBKY_06890) - 1348253..1348495 (+) 243 WP_003211408.1 YkuS family protein -
  ACLBKY_RS06895 (ACLBKY_06895) - 1348520..1349329 (-) 810 WP_224559788.1 mechanosensitive ion channel family protein -
  ACLBKY_RS06900 (ACLBKY_06900) ahpA 1349601..1350143 (+) 543 WP_007498654.1 biofilm-specific peroxidase AhpA -
  ACLBKY_RS06905 (ACLBKY_06905) - 1350419..1350877 (+) 459 WP_008345174.1 TlpA disulfide reductase family protein -
  ACLBKY_RS06910 (ACLBKY_06910) rok 1351359..1351940 (+) 582 WP_007498648.1 hypothetical protein Regulator
  ACLBKY_RS06915 (ACLBKY_06915) - 1352003..1352920 (-) 918 WP_008345172.1 hypothetical protein -
  ACLBKY_RS06920 (ACLBKY_06920) - 1353004..1353585 (+) 582 WP_414835248.1 molybdenum cofactor guanylyltransferase -
  ACLBKY_RS06925 (ACLBKY_06925) - 1353615..1354631 (+) 1017 WP_414835249.1 MoeB/ThiF family adenylyltransferase -
  ACLBKY_RS06930 (ACLBKY_06930) glp 1354641..1355915 (+) 1275 WP_414835250.1 gephyrin-like molybdotransferase Glp -
  ACLBKY_RS06935 (ACLBKY_06935) mobB 1355897..1356424 (+) 528 WP_414835251.1 molybdopterin-guanine dinucleotide biosynthesis protein B -
  ACLBKY_RS06940 (ACLBKY_06940) - 1356417..1356908 (+) 492 WP_008345161.1 molybdenum cofactor biosynthesis protein MoaE -

Sequence

Protein


Download         Length: 193 a.a.        Molecular weight: 21861.83 Da        Isoelectric Point: 9.7309

>NTDB_id=1094734 ACLBKY_RS06910 WP_007498648.1 1351359..1351940(+) (rok) [Bacillus altitudinis strain Ba 5]
MFNEREALRLRLEQLNEAEVKVIREYQIERDAIYAKLRELDRQGTGLVTDTKKEVRTERKTDSLPVLAELAAQEMRSYNQ
PAQTQSNVTSSLGTGQLNGAPVGIPEGSTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNM
TTFMQSLIKMYPEVKKPYRGQYILEGDIQTEDE

Nucleotide


Download         Length: 582 bp        

>NTDB_id=1094734 ACLBKY_RS06910 WP_007498648.1 1351359..1351940(+) (rok) [Bacillus altitudinis strain Ba 5]
TTGTTTAATGAGAGGGAAGCGTTACGTTTACGATTGGAACAATTAAATGAAGCAGAAGTAAAGGTCATCCGTGAATATCA
AATTGAACGAGATGCGATTTACGCAAAACTAAGAGAATTAGACCGTCAAGGTACAGGTCTCGTCACAGATACAAAAAAAG
AAGTACGTACAGAGAGAAAAACAGATTCACTGCCTGTATTAGCTGAGCTGGCTGCACAAGAAATGAGAAGCTACAATCAG
CCTGCGCAAACGCAGTCAAACGTTACATCATCTTTAGGAACAGGTCAGCTAAATGGTGCACCTGTAGGTATTCCTGAAGG
ATCTACAAGACGCAGAAGAGGCACAGCTAGACCTGGATCAAAGGCAGCTAAGCTTCGTGAAGCTGCAATCAAAACATTAA
AGCGTCATAATGCGGCGATTAAAAGCTCTGAACTTCAAAAAGAGATTGAAAAAGAGAGCGGTCTTGAAATTCCAAATATG
ACAACGTTTATGCAAAGCTTAATTAAAATGTACCCAGAAGTGAAGAAACCTTATCGCGGACAGTATATTTTAGAAGGCGA
CATTCAAACAGAAGACGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

79.474

98.446

0.782

Multiple sequence alignment