Detailed information    

insolico Bioinformatically predicted

Overview


Name   med   Type   Regulator
Locus tag   ACLBKY_RS05560 Genome accession   NZ_CP180233
Coordinates   1104009..1104974 (+) Length   321 a.a.
NCBI ID   WP_008348509.1    Uniprot ID   A0A9X0FWP2
Organism   Bacillus altitudinis strain Ba 5     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context


Location: 1099009..1109974
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACLBKY_RS05530 (ACLBKY_05530) argF 1099332..1100282 (+) 951 WP_008348520.1 ornithine carbamoyltransferase -
  ACLBKY_RS05535 (ACLBKY_05535) - 1100386..1100565 (+) 180 WP_008348517.1 YjzC family protein -
  ACLBKY_RS05540 (ACLBKY_05540) - 1100735..1102000 (+) 1266 WP_060832237.1 MFS transporter -
  ACLBKY_RS05545 (ACLBKY_05545) - 1102120..1102314 (-) 195 WP_008348514.1 YjzD family protein -
  ACLBKY_RS05550 (ACLBKY_05550) - 1102527..1103267 (+) 741 WP_007499048.1 hypothetical protein -
  ACLBKY_RS05555 (ACLBKY_05555) - 1103343..1103918 (+) 576 WP_414835215.1 nad binding enzyme -
  ACLBKY_RS05560 (ACLBKY_05560) med 1104009..1104974 (+) 966 WP_008348509.1 BMP family ABC transporter substrate-binding protein Regulator
  ACLBKY_RS05565 (ACLBKY_05565) comZ 1104986..1105183 (+) 198 WP_008348507.1 ComZ family protein Regulator
  ACLBKY_RS05570 (ACLBKY_05570) - 1105194..1105427 (-) 234 WP_008348506.1 hypothetical protein -
  ACLBKY_RS05575 (ACLBKY_05575) - 1105597..1106535 (+) 939 WP_008348504.1 beta-ketoacyl-ACP synthase III -
  ACLBKY_RS05580 (ACLBKY_05580) fabF 1106557..1107798 (+) 1242 WP_008348501.1 beta-ketoacyl-ACP synthase II -
  ACLBKY_RS05585 (ACLBKY_05585) - 1107876..1108670 (+) 795 WP_056407963.1 DUF2268 domain-containing protein -
  ACLBKY_RS05590 (ACLBKY_05590) - 1108842..1109822 (+) 981 WP_414835216.1 ABC transporter ATP-binding protein -

Sequence


Protein


Download         Length: 321 a.a.        Molecular weight: 35902.89 Da        Isoelectric Point: 5.9297

>NTDB_id=1094724 ACLBKY_RS05560 WP_008348509.1 1104009..1104974(+) (med) [Bacillus altitudinis strain Ba 5]
MKYQRLVMIFSFLLLMLSACSQAPLKGHIEKVGLLVPDTINDQVWGTKGYKGLLNIQSTFGVDVYYKEGMVDKEKIVDAI
EEFHKKGVNLIIGHGNEYSEIFNLISEDYPKTQFITVNGGKPQADNVTNVTFKGEAMGFFGGMTAAHMSKTKKIGILATY
DWQSEVDGFIKGAKYQDEHVQVLAEFVENWDDADKAVNLYQKLKKQGVDVVYPAGDGYNIPVIEQIKNDNLSAIGYVTDQ
SNLGSHTVLTSTVQHVDKAYSIIAKKFNEGKLNEQGEYSFDFKEGVIEMGKFSSTIDRAFVKDIEKDIANYKKTGKLPNE
K

Nucleotide


Download         Length: 966 bp        

>NTDB_id=1094724 ACLBKY_RS05560 WP_008348509.1 1104009..1104974(+) (med) [Bacillus altitudinis strain Ba 5]
ATGAAGTACCAGCGGCTTGTCATGATCTTTTCGTTCCTTCTTCTTATGCTATCTGCCTGCTCGCAGGCGCCGTTAAAAGG
ACATATTGAGAAGGTGGGTTTACTCGTCCCCGATACGATTAATGATCAAGTTTGGGGAACGAAAGGTTATAAAGGCTTAT
TAAATATCCAATCAACATTTGGTGTAGATGTTTATTATAAGGAAGGGATGGTCGACAAGGAGAAAATCGTTGATGCCATT
GAAGAATTTCATAAAAAAGGAGTCAATTTGATTATTGGCCATGGCAATGAATACAGCGAAATTTTCAACTTGATCAGTGA
AGATTATCCGAAAACACAATTTATCACGGTCAATGGAGGCAAGCCTCAAGCTGATAATGTCACAAACGTCACGTTTAAAG
GAGAAGCTATGGGCTTTTTCGGAGGCATGACAGCAGCACATATGTCCAAAACAAAAAAGATTGGTATTCTGGCTACATAT
GATTGGCAAAGTGAAGTAGACGGTTTTATCAAAGGTGCAAAATATCAGGACGAACATGTGCAAGTTCTAGCGGAATTTGT
CGAAAACTGGGATGATGCTGACAAAGCGGTGAACCTCTATCAAAAATTGAAAAAACAAGGTGTAGATGTTGTGTATCCAG
CAGGTGATGGTTATAATATCCCTGTCATTGAACAAATCAAAAACGACAATTTATCTGCGATCGGATATGTCACTGATCAA
TCCAACCTTGGAAGCCATACGGTGTTAACTAGCACAGTACAGCATGTCGATAAAGCGTACAGTATCATTGCGAAGAAGTT
TAATGAAGGCAAGCTAAACGAACAAGGTGAGTACTCCTTTGACTTTAAAGAAGGAGTGATCGAAATGGGGAAATTTAGCT
CAACCATAGACCGCGCTTTTGTGAAAGACATTGAGAAGGATATTGCGAATTACAAAAAAACAGGCAAACTGCCAAATGAA
AAGTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  med Bacillus subtilis subsp. subtilis str. 168

64.65

97.819

0.632


Multiple sequence alignment