Detailed information    

insolico Bioinformatically predicted

Overview

Name   nucA/comI   Type   Machinery gene
Locus tag   ACLBKY_RS01995 Genome accession   NZ_CP180233
Coordinates   366858..367286 (-) Length   142 a.a.
NCBI ID   WP_007498233.1    Uniprot ID   A0AAU7FLT6
Organism   Bacillus altitudinis strain Ba 5     
Function   cleavage of dsDNA into ssDNA (predicted from homology)   
DNA processing

Genomic Context

Location: 361858..372286
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACLBKY_RS01965 (ACLBKY_01965) - 362003..362332 (+) 330 WP_007498247.1 YckD family protein -
  ACLBKY_RS01970 (ACLBKY_01970) - 362379..363143 (-) 765 WP_414835077.1 MBL fold metallo-hydrolase -
  ACLBKY_RS01975 (ACLBKY_01975) - 363259..363678 (+) 420 WP_008347846.1 Lrp/AsnC family transcriptional regulator -
  ACLBKY_RS01980 (ACLBKY_01980) - 363703..364509 (+) 807 WP_414835078.1 aminoglycoside N(3)-acetyltransferase -
  ACLBKY_RS01985 (ACLBKY_01985) comJ 364511..364897 (-) 387 WP_146271410.1 competence protein ComJ -
  ACLBKY_RS01990 (ACLBKY_01990) - 365034..366731 (-) 1698 WP_414835079.1 methyl-accepting chemotaxis protein -
  ACLBKY_RS01995 (ACLBKY_01995) nucA/comI 366858..367286 (-) 429 WP_007498233.1 NucA/NucB deoxyribonuclease domain-containing protein Machinery gene
  ACLBKY_RS02000 (ACLBKY_02000) - 367653..369722 (+) 2070 WP_414835080.1 hydantoinase/oxoprolinase family protein -
  ACLBKY_RS02005 (ACLBKY_02005) - 369712..371697 (+) 1986 WP_035703172.1 hydantoinase B/oxoprolinase family protein -

Sequence

Protein


Download         Length: 142 a.a.        Molecular weight: 15926.90 Da        Isoelectric Point: 6.4881

>NTDB_id=1094714 ACLBKY_RS01995 WP_007498233.1 366858..367286(-) (nucA/comI) [Bacillus altitudinis strain Ba 5]
MKLLKTILLLLLIVIGIATGYVQLGQHKQETTNSSYDKTIHFPSDRYPETAKHIEEAIDEGHSSICTIDRKNSDEQRDKS
LHGIPTKRGYDRDEWPMAMCKEGGAGASVKYVRPSDNRGAGSWVSHQLSDDPDGTRIQFIIE

Nucleotide


Download         Length: 429 bp        

>NTDB_id=1094714 ACLBKY_RS01995 WP_007498233.1 366858..367286(-) (nucA/comI) [Bacillus altitudinis strain Ba 5]
ATGAAACTTCTTAAAACCATTCTCTTGCTTTTATTGATTGTCATTGGTATAGCTACAGGCTATGTCCAACTAGGGCAACA
TAAACAAGAGACGACAAACTCTTCTTATGACAAAACCATTCACTTTCCATCAGATCGATATCCAGAAACCGCAAAGCACA
TAGAAGAAGCTATTGACGAAGGTCATTCTTCCATTTGCACCATTGATCGAAAAAATAGTGATGAGCAAAGAGACAAATCA
CTTCATGGCATTCCAACAAAGCGTGGTTATGATCGTGATGAATGGCCAATGGCGATGTGTAAAGAAGGTGGAGCAGGGGC
TTCTGTCAAATATGTACGGCCTTCGGATAATAGGGGGGCAGGCTCTTGGGTAAGTCATCAATTATCAGATGATCCTGATG
GCACAAGAATCCAATTTATTATCGAGTAG

Domains

Predicted by InterproScan.

Deoxyribonuclease NucA/NucB (DNase_NucA_NucB)

(46-136)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nucA/comI Bacillus subtilis subsp. subtilis str. 168

68.224

75.352

0.514

Multiple sequence alignment