Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | ACLBKY_RS00255 | Genome accession | NZ_CP180233 |
| Coordinates | 47302..47592 (-) | Length | 96 a.a. |
| NCBI ID | WP_087975202.1 | Uniprot ID | - |
| Organism | Bacillus altitudinis strain Ba 5 | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 42302..52592
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACLBKY_RS00215 (ACLBKY_00215) | - | 42335..42664 (+) | 330 | WP_012008640.1 | cyclic-di-AMP receptor | - |
| ACLBKY_RS00220 (ACLBKY_00220) | - | 42677..43117 (+) | 441 | WP_035391564.1 | YaaR family protein | - |
| ACLBKY_RS00225 (ACLBKY_00225) | holB | 43129..44118 (+) | 990 | WP_007496231.1 | DNA polymerase III subunit delta' | - |
| ACLBKY_RS00230 (ACLBKY_00230) | - | 44121..44948 (+) | 828 | WP_007496230.1 | stage 0 sporulation family protein | - |
| ACLBKY_RS00235 (ACLBKY_00235) | yabA | 44963..45316 (+) | 354 | WP_007496228.1 | DNA replication initiation control protein YabA | - |
| ACLBKY_RS00240 (ACLBKY_00240) | - | 45372..46115 (+) | 744 | WP_039962495.1 | tRNA1(Val) (adenine(37)-N6)-methyltransferase | - |
| ACLBKY_RS00245 (ACLBKY_00245) | - | 46102..46401 (+) | 300 | WP_019744059.1 | GIY-YIG nuclease family protein | - |
| ACLBKY_RS00250 (ACLBKY_00250) | rsmI | 46376..47257 (+) | 882 | WP_008341890.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| ACLBKY_RS00255 (ACLBKY_00255) | abrB | 47302..47592 (-) | 291 | WP_087975202.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Regulator |
| ACLBKY_RS00260 (ACLBKY_00260) | metG | 48112..50112 (+) | 2001 | WP_008341884.1 | methionine--tRNA ligase | - |
| ACLBKY_RS00265 (ACLBKY_00265) | - | 50194..50961 (+) | 768 | WP_217816660.1 | TatD family hydrolase | - |
| ACLBKY_RS00270 (ACLBKY_00270) | - | 51206..52408 (+) | 1203 | WP_017359324.1 | G5 and 3D domain-containing protein | - |
Sequence
Protein
Download Length: 96 a.a. Molecular weight: 10853.65 Da Isoelectric Point: 7.9655
>NTDB_id=1094711 ACLBKY_RS00255 WP_087975202.1 47302..47592(-) (abrB) [Bacillus altitudinis strain Ba 5]
MKMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLANGKLVLSREG
AEQIINEIQNQLQSQK
MKMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLANGKLVLSREG
AEQIINEIQNQLQSQK
Nucleotide
Download Length: 291 bp
>NTDB_id=1094711 ACLBKY_RS00255 WP_087975202.1 47302..47592(-) (abrB) [Bacillus altitudinis strain Ba 5]
ATGAAGATGAAATCTACAGGTATTGTACGTAAAGTTGACGAATTAGGACGCGTGGTGATTCCAATCGAGCTTCGCCGTAC
GTTAGGAATCGCAGAAAAAGACGCTTTGGAAATTTATGTTGATGATGAAAAAATTATCCTAAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACAGGTGAAGTATCAGACGATAACCTTAAACTTGCTAATGGTAAATTAGTTCTTAGCCGTGAAGGT
GCAGAGCAAATCATTAACGAAATCCAAAACCAACTTCAATCACAAAAATAA
ATGAAGATGAAATCTACAGGTATTGTACGTAAAGTTGACGAATTAGGACGCGTGGTGATTCCAATCGAGCTTCGCCGTAC
GTTAGGAATCGCAGAAAAAGACGCTTTGGAAATTTATGTTGATGATGAAAAAATTATCCTAAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACAGGTGAAGTATCAGACGATAACCTTAAACTTGCTAATGGTAAATTAGTTCTTAGCCGTGAAGGT
GCAGAGCAAATCATTAACGAAATCCAAAACCAACTTCAATCACAAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
93.75 |
100 |
0.938 |