Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   ACLBKW_RS06950 Genome accession   NZ_CP180232
Coordinates   1372872..1373453 (+) Length   193 a.a.
NCBI ID   WP_007498648.1    Uniprot ID   -
Organism   Bacillus altitudinis strain Ba     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1367872..1378453
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACLBKW_RS06925 (ACLBKW_06925) - 1368538..1369716 (+) 1179 WP_125588953.1 N-acetyldiaminopimelate deacetylase -
  ACLBKW_RS06930 (ACLBKW_06930) - 1369767..1370009 (+) 243 WP_024424725.1 YkuS family protein -
  ACLBKW_RS06935 (ACLBKW_06935) - 1370034..1370843 (-) 810 WP_008347975.1 mechanosensitive ion channel family protein -
  ACLBKW_RS06940 (ACLBKW_06940) ahpA 1371115..1371657 (+) 543 WP_007498654.1 biofilm-specific peroxidase AhpA -
  ACLBKW_RS06945 (ACLBKW_06945) - 1371933..1372391 (+) 459 WP_008345174.1 TlpA disulfide reductase family protein -
  ACLBKW_RS06950 (ACLBKW_06950) rok 1372872..1373453 (+) 582 WP_007498648.1 hypothetical protein Regulator
  ACLBKW_RS06955 (ACLBKW_06955) - 1373516..1374433 (-) 918 WP_025207264.1 hypothetical protein -
  ACLBKW_RS06960 (ACLBKW_06960) - 1374517..1375098 (+) 582 WP_169476038.1 molybdenum cofactor guanylyltransferase -
  ACLBKW_RS06965 (ACLBKW_06965) - 1375128..1376144 (+) 1017 WP_060832295.1 ThiF family adenylyltransferase -
  ACLBKW_RS06970 (ACLBKW_06970) glp 1376154..1377428 (+) 1275 WP_060832296.1 gephyrin-like molybdotransferase Glp -
  ACLBKW_RS06975 (ACLBKW_06975) mobB 1377410..1377937 (+) 528 WP_060832826.1 molybdopterin-guanine dinucleotide biosynthesis protein B -
  ACLBKW_RS06980 (ACLBKW_06980) - 1377930..1378421 (+) 492 WP_008345161.1 molybdenum cofactor biosynthesis protein MoaE -

Sequence

Protein


Download         Length: 193 a.a.        Molecular weight: 21861.83 Da        Isoelectric Point: 9.7309

>NTDB_id=1094673 ACLBKW_RS06950 WP_007498648.1 1372872..1373453(+) (rok) [Bacillus altitudinis strain Ba]
MFNEREALRLRLEQLNEAEVKVIREYQIERDAIYAKLRELDRQGTGLVTDTKKEVRTERKTDSLPVLAELAAQEMRSYNQ
PAQTQSNVTSSLGTGQLNGAPVGIPEGSTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNM
TTFMQSLIKMYPEVKKPYRGQYILEGDIQTEDE

Nucleotide


Download         Length: 582 bp        

>NTDB_id=1094673 ACLBKW_RS06950 WP_007498648.1 1372872..1373453(+) (rok) [Bacillus altitudinis strain Ba]
TTGTTTAATGAGAGGGAAGCGTTACGTTTACGATTGGAACAATTAAATGAAGCAGAAGTAAAGGTCATCCGTGAATATCA
AATTGAACGAGATGCGATTTACGCAAAACTAAGAGAATTAGACCGTCAAGGTACAGGTCTCGTCACAGATACAAAAAAAG
AAGTACGTACAGAGAGAAAAACAGATTCACTGCCTGTATTAGCTGAGCTGGCTGCACAAGAAATGAGAAGCTACAATCAG
CCTGCGCAAACGCAGTCAAACGTTACATCATCTTTAGGAACAGGTCAGCTAAATGGTGCACCTGTAGGTATTCCTGAAGG
ATCTACAAGACGCAGAAGAGGCACAGCTAGACCTGGATCAAAGGCAGCTAAGCTTCGTGAAGCTGCAATCAAAACATTAA
AGCGTCATAATGCGGCGATTAAAAGCTCTGAACTTCAAAAAGAGATTGAAAAAGAGAGCGGTCTTGAAATTCCAAATATG
ACAACGTTTATGCAAAGCTTAATTAAAATGTACCCAGAAGTGAAGAAACCTTATCGCGGACAGTATATTTTAGAAGGCGA
CATTCAAACAGAAGACGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

79.474

98.446

0.782

Multiple sequence alignment