Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   ACLBKW_RS06820 Genome accession   NZ_CP180232
Coordinates   1352373..1352834 (-) Length   153 a.a.
NCBI ID   WP_007498684.1    Uniprot ID   A0A9X0FXQ0
Organism   Bacillus altitudinis strain Ba     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1347373..1357834
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACLBKW_RS06795 (ACLBKW_06795) - 1347926..1348810 (+) 885 WP_144684367.1 cation diffusion facilitator family transporter -
  ACLBKW_RS06800 (ACLBKW_06800) - 1348875..1349027 (-) 153 WP_017367142.1 hypothetical protein -
  ACLBKW_RS06805 (ACLBKW_06805) - 1349328..1349867 (+) 540 WP_007498690.1 RDD family protein -
  ACLBKW_RS06810 (ACLBKW_06810) - 1349992..1351302 (+) 1311 WP_008348037.1 MFS transporter -
  ACLBKW_RS06815 (ACLBKW_06815) - 1351376..1352284 (+) 909 WP_008348035.1 chemotaxis protein -
  ACLBKW_RS06820 (ACLBKW_06820) kre 1352373..1352834 (-) 462 WP_007498684.1 YkyB family protein Regulator
  ACLBKW_RS06825 (ACLBKW_06825) - 1353054..1353950 (-) 897 WP_008348020.1 helix-turn-helix domain-containing protein -
  ACLBKW_RS06830 (ACLBKW_06830) - 1354064..1355008 (+) 945 WP_056704828.1 DMT family transporter -
  ACLBKW_RS06835 (ACLBKW_06835) - 1355165..1355380 (-) 216 WP_008348016.1 hypothetical protein -
  ACLBKW_RS06840 (ACLBKW_06840) - 1355548..1355724 (+) 177 WP_251185956.1 hypothetical protein -
  ACLBKW_RS06845 (ACLBKW_06845) - 1355950..1357227 (-) 1278 WP_056704826.1 MFS transporter -
  ACLBKW_RS06850 (ACLBKW_06850) - 1357301..1357798 (-) 498 WP_008348009.1 L,D-transpeptidase family protein -

Sequence

Protein


Download         Length: 153 a.a.        Molecular weight: 17739.31 Da        Isoelectric Point: 10.2617

>NTDB_id=1094672 ACLBKW_RS06820 WP_007498684.1 1352373..1352834(-) (kre) [Bacillus altitudinis strain Ba]
MDDYAHTKDIEPTAENIAKAIYTVNRHAKTAPNPKFLYLLKKRALQKLLQEGKGRKVGLHFSNNPRYSQQQSDVLIEIGD
YYFHLPPTKEDFEFLPHLGNLNQSYRNPKANMSLNRAKQILQTYVGLKEKPAATKQKSHYTKPVFKRLGESYF

Nucleotide


Download         Length: 462 bp        

>NTDB_id=1094672 ACLBKW_RS06820 WP_007498684.1 1352373..1352834(-) (kre) [Bacillus altitudinis strain Ba]
ATGGACGATTATGCTCATACTAAAGACATAGAACCTACAGCAGAAAACATCGCAAAAGCCATTTATACTGTTAACCGCCA
TGCTAAAACCGCACCAAATCCCAAGTTTCTTTATCTTTTGAAAAAACGTGCGCTGCAAAAACTATTGCAAGAAGGTAAAG
GAAGAAAAGTGGGCCTACATTTCTCTAACAATCCCAGATATAGTCAACAACAGTCCGACGTGCTGATTGAAATTGGAGAT
TATTATTTTCATCTGCCACCAACTAAAGAAGACTTCGAATTTTTGCCACACTTAGGAAATTTAAATCAATCATATCGCAA
TCCGAAAGCGAATATGTCATTAAATCGAGCGAAACAAATACTTCAAACGTATGTCGGTTTAAAAGAAAAACCTGCCGCCA
CAAAACAAAAATCACATTATACAAAACCCGTCTTCAAACGGCTCGGGGAAAGTTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

76.623

100

0.771

Multiple sequence alignment