Detailed information    

insolico Bioinformatically predicted

Overview

Name   luxO   Type   Regulator
Locus tag   ACMVO4_RS10900 Genome accession   NZ_CP180205
Coordinates   2401882..2403276 (-) Length   464 a.a.
NCBI ID   WP_171801944.1    Uniprot ID   A0AAE7AUU6
Organism   Vibrio europaeus strain EX1     
Function   promote HapR production (predicted from homology)   
Competence regulation

Genomic Context

Location: 2396882..2408276
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACMVO4_RS10865 (ACMVO4_10865) moaE 2397597..2398058 (-) 462 WP_414931368.1 molybdopterin synthase catalytic subunit MoaE -
  ACMVO4_RS10870 (ACMVO4_10870) moaD 2398061..2398306 (-) 246 WP_069666899.1 molybdopterin synthase sulfur carrier subunit -
  ACMVO4_RS10875 (ACMVO4_10875) moaC 2398303..2398782 (-) 480 WP_069666900.1 cyclic pyranopterin monophosphate synthase MoaC -
  ACMVO4_RS10880 (ACMVO4_10880) moaB 2398798..2399310 (-) 513 WP_004748419.1 molybdenum cofactor biosynthesis protein B -
  ACMVO4_RS10885 (ACMVO4_10885) moaA 2399387..2400376 (-) 990 WP_171383381.1 GTP 3',8-cyclase MoaA -
  ACMVO4_RS10890 (ACMVO4_10890) - 2400668..2401555 (+) 888 WP_069666901.1 YvcK family protein -
  ACMVO4_RS10895 (ACMVO4_10895) luxU 2401541..2401882 (-) 342 WP_414931369.1 quorum-sensing phosphorelay protein LuxU -
  ACMVO4_RS10900 (ACMVO4_10900) luxO 2401882..2403276 (-) 1395 WP_171801944.1 quorum-sensing sigma-54 dependent transcriptional regulator LuxO Regulator
  ACMVO4_RS10905 (ACMVO4_10905) uvrB 2403538..2405568 (-) 2031 WP_069666903.1 excinuclease ABC subunit UvrB -
  ACMVO4_RS10915 (ACMVO4_10915) - 2406431..2407159 (-) 729 WP_171801946.1 UTRA domain-containing protein -

Sequence

Protein


Download         Length: 464 a.a.        Molecular weight: 51578.89 Da        Isoelectric Point: 5.7859

>NTDB_id=1094516 ACMVO4_RS10900 WP_171801944.1 2401882..2403276(-) (luxO) [Vibrio europaeus strain EX1]
MQYNTQAKNSKYLLMVEDTASVAALYRSYLTPLQIDINIVGTGRDAIDSLNFRTPDLILLDLRLPDMTGMDVLHAVKEKN
PDVPVIFMTAHGSIDTAVEAMRHGAQDFLIKPCEADRLRVTVNNALRKANKLKNEGDNSGSQGYQGFIGSSQTMQAVYRT
IDSAATSKASIFITGESGTGKEVCAEAIHATSKRGDKPFIAINCAAIPKDLIESELFGHVKGAFTGAATDRQGAAELADG
GTLFLDELCEMDLDLQTKLLRFIQTGTFQKVGSSKMKSVDVRFVCATNKDPWKEVEEGRFREDLYYRLYVIPLHLPPLRE
RGDDIIEIAYSLLGFMSKEEGKDFVRLAAEVVDRFARYEWPGNVRQLQNVLRNVVVLNNGREIDLAMLPPPLNQPSKNEI
RVTRPQNETVSVQDIFPLWLTEKNAIEQAIKACDGNIPKAAGYLDVSPSTIYRKLQAWNAKEVQ

Nucleotide


Download         Length: 1395 bp        

>NTDB_id=1094516 ACMVO4_RS10900 WP_171801944.1 2401882..2403276(-) (luxO) [Vibrio europaeus strain EX1]
ATGCAATATAATACACAAGCAAAAAACTCAAAGTATTTGTTGATGGTTGAAGATACCGCCTCTGTAGCGGCGCTGTATCG
TTCTTATCTCACGCCACTGCAAATTGATATCAACATTGTCGGCACTGGCCGTGATGCCATTGATAGCCTCAATTTTCGAA
CTCCAGACCTTATCCTGCTCGATCTGCGACTACCTGATATGACAGGTATGGACGTCTTGCACGCGGTGAAAGAAAAGAAC
CCGGATGTGCCCGTTATTTTTATGACCGCCCATGGTTCGATTGATACCGCCGTAGAAGCAATGCGTCATGGCGCGCAAGA
CTTCCTAATTAAACCCTGTGAAGCTGATCGACTCCGTGTAACAGTTAACAACGCTCTGCGTAAAGCGAACAAGCTGAAAA
ACGAAGGTGATAATTCGGGAAGTCAGGGATATCAAGGTTTCATCGGCAGTAGTCAAACGATGCAGGCGGTTTACAGAACC
ATTGACTCGGCGGCGACGAGTAAAGCCAGTATCTTTATTACTGGAGAAAGTGGTACTGGTAAAGAAGTGTGTGCAGAAGC
AATTCACGCAACCAGTAAACGTGGTGACAAACCGTTTATTGCCATCAACTGTGCTGCCATCCCAAAAGATCTGATTGAAA
GTGAGCTATTTGGTCACGTTAAAGGCGCATTTACCGGTGCTGCTACGGATCGCCAAGGTGCGGCGGAGCTTGCTGATGGC
GGCACGCTTTTCCTTGATGAGCTGTGTGAAATGGACTTAGATTTGCAAACTAAGCTATTACGTTTTATTCAAACTGGTAC
TTTCCAGAAAGTTGGTTCGTCGAAGATGAAGAGCGTGGATGTACGTTTTGTTTGTGCAACCAATAAAGATCCTTGGAAAG
AAGTCGAAGAAGGGCGCTTTCGCGAAGATTTGTACTATCGTTTGTATGTTATTCCTCTTCATTTGCCACCTTTGCGTGAA
CGCGGTGACGATATCATTGAAATTGCCTATTCACTGCTGGGTTTCATGTCTAAGGAAGAGGGTAAAGATTTTGTGCGTTT
GGCGGCTGAGGTCGTCGACCGTTTCGCGCGCTACGAATGGCCGGGCAATGTACGCCAGCTGCAAAATGTTTTACGTAATG
TGGTGGTATTAAATAATGGCCGTGAGATTGATTTAGCCATGTTGCCACCACCACTCAATCAGCCTTCAAAAAATGAGATT
CGAGTGACTAGGCCGCAAAATGAAACAGTCTCAGTACAAGATATCTTCCCTTTGTGGCTTACTGAGAAAAATGCCATTGA
GCAGGCAATAAAAGCGTGTGATGGTAACATACCGAAAGCCGCGGGCTATTTGGATGTAAGCCCATCAACGATTTACAGAA
AACTACAAGCGTGGAATGCCAAGGAAGTACAATAG

Domains

Predicted by InterproScan.

Bacterial regulatory protein, Fis family (HTH_8)

(418-458)

Sigma-54 interaction domain (Sigma54_activat)

(148-313)

Response regulator receiver domain (Response_reg)

(14-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  luxO Vibrio cholerae strain A1552

87.892

96.121

0.845

Multiple sequence alignment