Detailed information    

insolico Bioinformatically predicted

Overview


Name   luxO   Type   Regulator
Locus tag   ACMVO4_RS07895 Genome accession   NZ_CP180205
Coordinates   1706199..1707668 (+) Length   489 a.a.
NCBI ID   WP_414931081.1    Uniprot ID   -
Organism   Vibrio europaeus strain EX1     
Function   promote HapR production (predicted from homology)   
Competence regulation

Genomic Context


Location: 1701199..1712668
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACMVO4_RS07880 (ACMVO4_07880) - 1702347..1703042 (+) 696 WP_069666383.1 chromosome partitioning protein ParA -
  ACMVO4_RS07885 (ACMVO4_07885) - 1703051..1703851 (+) 801 WP_272249078.1 phosphate/phosphite/phosphonate ABC transporter substrate-binding protein -
  ACMVO4_RS07890 (ACMVO4_07890) - 1703864..1706176 (+) 2313 WP_272273943.1 ATP-binding protein -
  ACMVO4_RS07895 (ACMVO4_07895) luxO 1706199..1707668 (+) 1470 WP_414931081.1 sigma-54-dependent transcriptional regulator Regulator
  ACMVO4_RS07900 (ACMVO4_07900) - 1707649..1708677 (+) 1029 WP_171801640.1 glycosyltransferase family 4 protein -
  ACMVO4_RS07905 (ACMVO4_07905) - 1708893..1710098 (+) 1206 WP_272249074.1 glycosyltransferase family 4 protein -
  ACMVO4_RS07910 (ACMVO4_07910) - 1710091..1711266 (+) 1176 WP_272249073.1 glycosyltransferase family 4 protein -

Sequence


Protein


Download         Length: 489 a.a.        Molecular weight: 54866.86 Da        Isoelectric Point: 5.6508

>NTDB_id=1094511 ACMVO4_RS07895 WP_414931081.1 1706199..1707668(+) (luxO) [Vibrio europaeus strain EX1]
MKPKVLLIEDSTSLAILYKQYVKDEPYDLFHVETGREAIAFIERNVPQLVILDLKLPDMDGEQILDWINDNQVPTSVVIA
TAHGSVDLAVNLVQKGAKDFLEKPINADRLKTSIALHLQQAKLEHLVEDIENKFDRNRFHGFIGSSLPMQGVYKIIDSVA
PTTASVFIVGESGTGKEVCAEAIHKESKRKDKPFVAINCGAIPKDLMESEIFGHVKGAFTGATADRKGAASMANGGTLFL
DELCEMELEMQKKLLRFLQTGTFTPLGANKEMKVDVRIICATNRDPLVEVEEGRFREDLYYRVHVVPLDMPPLRDRGNDI
LTLATHFLKLYAKEDGKKFNAIHRDAESTLKRYAWPGNVRQLQNIVRNIVVLNDDSHLRLEHLPEQLTASRKPKPTTTSI
PTPTSQNPVMQATEHEVAGEVMQSIVSESPIDKPNTIRPMWQIEREAIQQAIDYCDGNVLNAAVLLELSPSTVYRKKQAW
EAEDEQQLV

Nucleotide


Download         Length: 1470 bp        

>NTDB_id=1094511 ACMVO4_RS07895 WP_414931081.1 1706199..1707668(+) (luxO) [Vibrio europaeus strain EX1]
ATGAAACCAAAAGTATTACTTATTGAAGACTCGACTTCGCTGGCGATTTTGTACAAACAGTATGTAAAAGATGAGCCTTA
TGACTTGTTTCACGTCGAGACAGGTAGAGAAGCTATCGCCTTTATAGAAAGAAACGTTCCGCAACTGGTGATTCTAGATC
TCAAATTGCCCGACATGGATGGCGAACAGATACTCGATTGGATCAATGATAACCAGGTACCCACGTCAGTTGTTATCGCC
ACTGCACATGGCTCTGTCGATCTCGCGGTTAACCTTGTTCAAAAAGGCGCAAAAGACTTCCTTGAAAAGCCAATCAATGC
AGACCGTTTAAAAACATCCATCGCGCTGCACCTGCAACAAGCTAAGCTCGAACACCTTGTTGAAGATATTGAAAATAAGT
TTGATCGCAACCGCTTCCACGGTTTTATTGGCTCAAGCTTACCTATGCAAGGCGTCTATAAGATCATTGACTCAGTCGCT
CCGACGACAGCCAGTGTGTTCATTGTTGGCGAAAGCGGTACTGGTAAAGAAGTTTGCGCCGAAGCGATTCACAAAGAAAG
TAAACGCAAAGACAAGCCGTTTGTCGCCATCAACTGTGGCGCTATTCCAAAAGACCTGATGGAAAGTGAAATATTTGGTC
ATGTCAAAGGCGCGTTTACTGGTGCGACTGCTGACAGAAAAGGCGCGGCATCGATGGCAAATGGCGGAACGCTATTTTTA
GATGAGCTTTGTGAGATGGAATTGGAAATGCAGAAGAAACTGTTAAGATTCCTTCAAACTGGCACCTTCACTCCACTCGG
CGCAAACAAAGAAATGAAGGTCGACGTCCGCATTATCTGTGCGACTAACCGAGATCCTCTGGTTGAAGTTGAAGAAGGAC
GATTTAGGGAAGATCTCTATTATCGTGTCCACGTCGTTCCACTTGATATGCCACCTCTTAGGGATCGCGGCAATGACATC
CTTACTTTGGCAACGCACTTCCTTAAACTTTACGCCAAGGAAGACGGGAAAAAGTTCAACGCTATTCATCGCGATGCCGA
ATCGACATTAAAGCGTTACGCATGGCCCGGCAACGTTCGCCAACTGCAAAACATCGTGCGCAATATAGTCGTGTTGAACG
ACGATAGTCACCTACGTCTGGAGCATTTACCAGAACAGTTGACCGCTAGTCGCAAGCCAAAACCGACGACGACATCTATA
CCAACCCCTACATCGCAAAACCCAGTAATGCAGGCTACGGAACACGAAGTAGCTGGTGAGGTAATGCAGTCTATCGTATC
AGAATCTCCCATAGACAAACCCAATACCATCAGACCAATGTGGCAGATAGAACGAGAAGCCATTCAGCAAGCCATCGACT
ATTGTGATGGTAACGTTCTAAACGCCGCCGTCTTACTAGAGTTAAGCCCATCAACGGTTTATCGCAAGAAACAAGCTTGG
GAAGCAGAAGATGAGCAACAACTCGTCTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  luxO Vibrio cholerae strain A1552

50.844

96.933

0.493


Multiple sequence alignment