Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   ACK8HE_RS13685 Genome accession   NZ_CP180192
Coordinates   2822855..2823481 (-) Length   208 a.a.
NCBI ID   WP_017384804.1    Uniprot ID   A0AA37AJW2
Organism   Enterobacter hormaechei strain K_21_ENCL_294     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 2817855..2828481
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACK8HE_RS13670 (ACK8HE_13670) helD 2818094..2820148 (-) 2055 WP_017693680.1 DNA helicase IV -
  ACK8HE_RS13675 (ACK8HE_13675) - 2820271..2820717 (+) 447 WP_003858149.1 YccF domain-containing protein -
  ACK8HE_RS13680 (ACK8HE_13680) yccS 2820736..2822898 (+) 2163 WP_015570895.1 YccS family putative transporter -
  ACK8HE_RS13685 (ACK8HE_13685) sxy/tfoX 2822855..2823481 (-) 627 WP_017384804.1 TfoX/Sxy family DNA transformation protein Regulator
  ACK8HE_RS13690 (ACK8HE_13690) sulA 2823699..2824208 (+) 510 WP_026094322.1 SOS-induced cell division inhibitor SulA -
  ACK8HE_RS13695 (ACK8HE_13695) ompA 2824565..2825617 (+) 1053 WP_017694761.1 porin OmpA -
  ACK8HE_RS13700 (ACK8HE_13700) matP 2825683..2826135 (-) 453 WP_017693682.1 macrodomain Ter protein MatP -
  ACK8HE_RS13705 (ACK8HE_13705) - 2826322..2828082 (+) 1761 WP_017693683.1 AAA family ATPase -

Sequence

Protein


Download         Length: 208 a.a.        Molecular weight: 24018.63 Da        Isoelectric Point: 9.4592

>NTDB_id=1094393 ACK8HE_RS13685 WP_017384804.1 2822855..2823481(-) (sxy/tfoX) [Enterobacter hormaechei strain K_21_ENCL_294]
MKKISYDRIYQSQEYLSPLGEIHHRALFGGYTLAVDEAVFAMVSDGELYLRACEQSAKYCVKNASSFLTLMKRGRPVLLN
YYRVDEGLWQNREKLLQLSSFALDAARKERYQRHQRNRLKDLPNLTFQIEVLLMEAGITNEETLRQLGAKTSWLKMRSKN
KALSIRVLFALEGAIEGLHEAALPADIRRELMEWFNALPESQGHHSAR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=1094393 ACK8HE_RS13685 WP_017384804.1 2822855..2823481(-) (sxy/tfoX) [Enterobacter hormaechei strain K_21_ENCL_294]
ATGAAAAAGATATCTTATGATCGGATTTATCAATCTCAAGAATACCTCTCTCCGCTGGGCGAAATTCATCATCGCGCCCT
GTTTGGCGGTTATACCCTGGCCGTGGATGAAGCGGTGTTCGCGATGGTGTCTGACGGCGAGCTGTACCTTCGCGCCTGTG
AGCAAAGTGCAAAATACTGTGTAAAAAACGCCTCCTCTTTTCTGACACTGATGAAACGAGGACGGCCAGTGCTGCTTAAT
TACTACCGTGTGGATGAAGGTCTGTGGCAAAACAGGGAAAAGCTGCTTCAGCTCTCCTCGTTTGCGCTCGATGCCGCCAG
GAAAGAGCGCTACCAGCGCCATCAGCGTAACCGGCTTAAGGATCTGCCGAACCTGACCTTTCAGATTGAGGTCCTGCTTA
TGGAGGCGGGCATTACCAATGAAGAGACGCTACGACAGTTGGGGGCGAAGACGAGCTGGCTGAAAATGCGCTCTAAGAAT
AAAGCGCTGAGTATCCGGGTATTGTTCGCGCTTGAAGGCGCCATCGAAGGGTTACATGAAGCGGCACTCCCGGCGGATAT
TCGCCGGGAGCTTATGGAGTGGTTTAATGCGCTGCCTGAGTCGCAGGGCCATCATTCCGCCAGGTAG

Domains

Predicted by InterproScan.

TfoX N-terminal domain (TfoX_N)

(14-106)

TfoX C-terminal domain (TfoX_C)

(116-194)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

58.911

97.115

0.572

Multiple sequence alignment