Detailed information NTG1094361

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: ACMDW7_RS03710
• Genome accession: NZ_CP180191
• Coordinates: 819917..821017 (+)
• Length: 366 a.a.
• NCBI ID: WP_377305454.1
• Uniprot ID: -
• Organism: Piscinibacterium candidicorallinum strain LMG 29480
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 814917..826017

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACMDW7_RS03680 (ACMDW7_03680)	ychF	815595..816689 (+)	1095	WP_377305461.1	redox-regulated ATPase YchF	-
ACMDW7_RS03685 (ACMDW7_03685)	-	816706..817260 (+)	555	WP_377305459.1	hypothetical protein	-
ACMDW7_RS03690 (ACMDW7_03690)	-	817298..818140 (+)	843	WP_377305458.1	MOSC domain-containing protein	-
ACMDW7_RS03695 (ACMDW7_03695)	-	818107..818430 (-)	324	WP_377305457.1	YfhL family 4Fe-4S dicluster ferredoxin	-
ACMDW7_RS03700 (ACMDW7_03700)	coaD	818435..818935 (-)	501	WP_377305456.1	pantetheine-phosphate adenylyltransferase	-
ACMDW7_RS03705 (ACMDW7_03705)	rsmD	819036..819713 (-)	678	WP_377305455.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
ACMDW7_RS03710 (ACMDW7_03710)	pilA	819917..821017 (+)	1101	WP_377305454.1	signal recognition particle-docking protein FtsY	Machinery gene
ACMDW7_RS03715 (ACMDW7_03715)	-	821279..822877 (+)	1599	WP_377305453.1	alpha/beta hydrolase family protein	-
ACMDW7_RS03720 (ACMDW7_03720)	-	822947..823606 (+)	660	WP_377305452.1	OmpW/AlkL family protein	-
ACMDW7_RS03725 (ACMDW7_03725)	-	823619..824134 (+)	516	WP_377305451.1	O-acetyl-ADP-ribose deacetylase	-
ACMDW7_RS03730 (ACMDW7_03730)	-	824153..824545 (+)	393	WP_377305450.1	nuclear transport factor 2 family protein	-
ACMDW7_RS03735 (ACMDW7_03735)	-	824557..825795 (-)	1239	WP_377305448.1	radical SAM protein	-

Sequence

Protein

• Length: 366 a.a.
• Molecular weight: 37912.40 Da
• Isoelectric Point: 6.5020

>NTDB_id=1094361 ACMDW7_RS03710 WP_377305454.1 819917..821017(+) (pilA) [Piscinibacterium candidicorallinum strain LMG 29480]
MFSFFRKKSPPPAVQPQVVESQAIAPQTAEAPATEPVSAPAAVAAPAPAANAAPAEAPATEAAEKKSWLARLKQGLSRTG
SSIAGVFGYVKVDEALFEQLEDALLMADCGVTATQKILAGLRARVKSERIEDAAAVRTALAKVLADHLRALERTPQVPAA
ADEKPWVVMIAGVNGAGKTTSIGKITHHLSEGGHSVLLAAADTFRAAAREQLAVWGNRNQVSVVSQEGADPGAVVFDAVQ
SARAKGIDVVIADTAGRLPTQLHLMEELKKIARVCGKALDGAPHERWLVIDGNTGQNAVAQVKAFNEALQLTGLIVTKLD
GTAKGGVLAAIASTCPVPVLFIGVGEQLQDLQPFSAEEFAGALTGA

Nucleotide

• Length: 1101 bp

>NTDB_id=1094361 ACMDW7_RS03710 WP_377305454.1 819917..821017(+) (pilA) [Piscinibacterium candidicorallinum strain LMG 29480]
ATGTTCAGCTTCTTCCGCAAGAAATCCCCGCCGCCTGCCGTTCAGCCGCAAGTCGTCGAGTCCCAGGCCATTGCGCCTCA
GACCGCCGAAGCGCCGGCCACCGAGCCGGTGAGCGCACCCGCCGCTGTGGCCGCGCCCGCGCCTGCAGCGAACGCCGCGC
CGGCGGAAGCACCCGCCACCGAAGCCGCCGAGAAGAAAAGCTGGCTCGCGCGTCTGAAGCAGGGTTTGTCGCGCACCGGC
AGCAGCATTGCCGGCGTGTTCGGTTACGTGAAGGTGGACGAGGCGCTGTTCGAGCAGCTTGAAGACGCGCTGCTCATGGC
CGACTGCGGCGTGACGGCCACCCAGAAAATCCTGGCGGGCTTGCGCGCCCGCGTGAAGAGCGAGCGCATCGAGGATGCCG
CCGCCGTGCGCACTGCGTTGGCGAAGGTGCTGGCAGATCACCTGCGGGCGCTGGAGCGGACCCCGCAGGTGCCTGCGGCG
GCCGACGAGAAACCCTGGGTGGTCATGATTGCGGGTGTGAATGGCGCGGGCAAGACCACCAGCATTGGCAAGATCACGCA
CCACTTGAGCGAGGGTGGGCACAGCGTGCTGCTGGCCGCGGCCGACACCTTTCGCGCTGCGGCGCGCGAGCAACTGGCCG
TGTGGGGCAACCGCAACCAGGTCAGCGTGGTGAGTCAGGAGGGCGCAGACCCTGGCGCGGTGGTGTTTGACGCGGTGCAG
AGCGCGCGCGCCAAGGGCATTGACGTGGTGATTGCCGACACCGCCGGCCGCCTGCCCACCCAGCTGCACCTGATGGAAGA
ACTGAAGAAGATCGCCCGCGTCTGCGGCAAGGCGCTGGACGGCGCGCCGCACGAACGCTGGCTGGTGATCGACGGCAACA
CCGGCCAGAACGCCGTGGCGCAGGTCAAGGCCTTCAACGAGGCGTTGCAGCTCACCGGCCTGATCGTCACCAAGCTGGAC
GGCACGGCCAAGGGCGGCGTGCTGGCGGCGATCGCCTCGACCTGCCCGGTGCCGGTGCTCTTCATCGGCGTGGGCGAGCA
ACTGCAGGATCTGCAGCCCTTCTCGGCCGAGGAGTTTGCCGGGGCGCTGACGGGTGCTTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (166-363)

• SRP54-type protein, helical bundle domain (SRP54_N) (82-142)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	54.131	95.902	0.519